RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR8B2Q96RD0 313 aa17.14■□□□□ 0.34
GPC1-202ENST00000420138 LRRK2Q5S007 2527 aa17.14■□□□□ 0.33
GPC1-202ENST00000420138 NXPH3O95157 252 aa17.14■□□□□ 0.33
GPC1-202ENST00000420138 RNASE11Q8TAA1 199 aaKnown RBP17.14■□□□□ 0.33
GPC1-202ENST00000420138 CD300LFQ8TDQ1 290 aa17.14■□□□□ 0.33
GPC1-202ENST00000420138 SAT2Q96F10 170 aaPredicted RBP17.14■□□□□ 0.33
GPC1-202ENST00000420138 NUDT19A8MXV4 375 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 RBFOX2O43251 390 aaKnown RBP eCLIP17.13■□□□□ 0.33
GPC1-202ENST00000420138 FCGR3BO75015 233 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 IGHV1-8P0DP01 117 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 MIDNQ504T8 468 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 UQCC3Q6UW78 93 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 ZNF295-AS1Q8N0V1 137 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 C8orf31Q8N9H6 132 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 ZNF383Q8NA42 475 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 BSCL2Q96G97 398 aaPredicted RBP17.13■□□□□ 0.33
GPC1-202ENST00000420138 PATZ1Q9HBE1 687 aaKnown RBP17.13■□□□□ 0.33
GPC1-202ENST00000420138 COA4Q9NYJ1 87 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 USF3Q68DE3 2245 aa17.13■□□□□ 0.33
GPC1-202ENST00000420138 BORCS7-ASMTA0A0B4J1R7 106 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 ZNF705EA8MWA4 302 aaPredicted RBP17.12■□□□□ 0.33
GPC1-202ENST00000420138 SCO1O75880 301 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 LY6G5BQ8NDX9 201 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 ARV1Q9H2C2 271 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 SSSCA1O60232 199 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 SULT1A2P50226 295 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 PAX9P55771 341 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 CLEC9AQ6UXN8 241 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 ZNF833PQ6ZTB9 187 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 STPG2Q8N412 459 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 LINC00311Q8N616 119 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 OR2C3Q8N628 320 aa17.12■□□□□ 0.33
GPC1-202ENST00000420138 C22orf46C9J442 243 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 CHST1O43916 411 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 HPRT1P00492 218 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 CT45A6P0DMU7 189 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 CT45A5P0DMU8 189 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 CT45A7P0DMV0 189 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 MMP9P14780 707 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 SMIM8Q96KF7 97 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 S1PR3Q99500 378 aa17.11■□□□□ 0.33
GPC1-202ENST00000420138 PPIAL4CA0A0B4J2A2 164 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 MARCH11A6NNE9 402 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 J3QR06 171 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 FBXO24O75426 580 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 PPIAL4GP0DN37 164 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 M6PRP20645 277 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 GPR6P46095 362 aaPredicted RBP17.1■□□□□ 0.33
GPC1-202ENST00000420138 THBS3P49746 956 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 VAMP2P63027 116 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 NHLH2Q02577 135 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 RAB39BQ96DA2 213 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 WFDC1Q9HC57 220 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 PRELID3BQ9Y3B1 194 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 ATG12O94817 140 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 EWSR1Q01844 656 aaKnown RBP eCLIP17.1■□□□□ 0.33
GPC1-202ENST00000420138 BPIFCQ8NFQ6 507 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 R3HDM4Q96D70 268 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 RBMXL1Q96E39 390 aaKnown RBP17.1■□□□□ 0.33
GPC1-202ENST00000420138 SLC25A31Q9H0C2 315 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 MMP26Q9NRE1 261 aa17.1■□□□□ 0.33
GPC1-202ENST00000420138 MALRD1Q5VYJ5 2156 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 FAM24AA6NFZ4 105 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 TOR1AO14656 332 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 KIR2DS2P43631 304 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 BLOC1S1P78537 153 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 SUN5Q8TC36 379 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 ST6GALNAC6Q969X2 333 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 CCL19Q99731 98 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 GINS3Q9BRX5 216 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 TMEM133Q9H2Q1 129 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 LYRM2Q9NU23 88 aaPredicted RBP17.09■□□□□ 0.33
GPC1-202ENST00000420138 TENM4Q6N022 2769 aa17.09■□□□□ 0.33
GPC1-202ENST00000420138 IGSF23A1L1A6 192 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 MED6O75586 246 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 COL8A1P27658 744 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 DLX1P56177 255 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 IL34Q6ZMJ4 242 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 ABHD12Q8N2K0 398 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 ADTRPQ96IZ2 230 aa17.08■□□□□ 0.33
GPC1-202ENST00000420138 CRYBG3Q68DQ2 2970 aa17.08■□□□□ 0.32
GPC1-202ENST00000420138 RBP4P02753 201 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 SEC11BP0C7V7 166 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 CAV2P51636 162 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 PXDC1Q5TGL8 231 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 H2BFWTQ7Z2G1 175 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 ZNF525Q8N782 197 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 OR9G1Q8NH87 305 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 PLA2G2EQ9NZK7 142 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 HSPB7Q9UBY9 170 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 FAM90A26D6RGX4 464 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 WRBO00258 174 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 SYNGR2O43760 224 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 IGHV4-39P01824 125 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 ZNF137PP52743 207 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 GNB2P62879 340 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 DIAPH2-AS1Q14236 149 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 TMEM252Q8N6L7 170 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 OR4S2Q8NH73 311 aa17.07■□□□□ 0.32
GPC1-202ENST00000420138 YLPM1P49750 1951 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms