RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 FAM74A3Q4VXF1 159 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SOHLH1Q5JUK2 328 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 C15orf54Q8N8G6 183 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 OR4A16Q8NH70 328 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 P2RX4Q99571 388 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RPUSD1Q9UJJ7 312 aaKnown RBP12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 RAI1Q7Z5J4 1906 aaPredicted RBP12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 FCGR3BO75015 233 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 OR2B11Q5JQS5 317 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 NCMAPQ5T1S8 102 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 NCR3LG1Q68D85 454 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ZNF439Q8NDP4 499 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 SFT2D1Q8WV19 159 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 KAAG1Q9UBP8 84 aa12.03□□□□□ -0.48
HLA-DPA1-242ENST00000419277 ASPMQ8IZT6 3477 aa12.02□□□□□ -0.48
HLA-DPA1-242ENST00000419277 PPIAL4EA0A075B759 164 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 DEFB108AA8MXU0 73 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 B9A039 149 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PPIAL4DF5H284 164 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 GFRA3O60609 400 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CYB5R3P00387 301 aaPredicted RBP12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PPIAL4FP0DN26 164 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 NPBWR1P48145 328 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 KLRB1Q12918 225 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 HAPLN4Q86UW8 402 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 ST6GALNAC3Q8NDV1 305 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 OR4C12Q96R67 309 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 DCTN5Q9BTE1 182 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PPIAL4AQ9Y536 164 aa12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 MAP1BP46821 2468 aaKnown RBP12.02□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PTPRQQ9UMZ3 2332 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 HCFC1P51610 2035 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 SAA2-SAA4A0A096LPE2 208 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PMS2P5A8MQ11 134 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 SAA2P0DJI9 122 aaPredicted RBP12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CA7P43166 264 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 NHLH1Q02575 133 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RTL8BQ17RB0 113 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 HFEQ30201 348 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 SPRNQ5BIV9 151 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 HEPN1Q6WQI6 88 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 C22orf34Q6ZV56 151 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CLDND2Q8NHS1 167 aa12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RNASE6Q93091 150 aaKnown RBP12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 SLC25A10Q9UBX3 287 aaPredicted RBP12.01□□□□□ -0.49
HLA-DPA1-242ENST00000419277 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 C15orf61A6NNL5 157 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 C9JQL5 133 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 FNDC10F2Z333 226 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TMEM178BH3BS89 294 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 GPR37O15354 613 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TMPRSS2O15393 492 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PROP1O75360 226 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 IFNA17P01571 189 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TFF1P04155 84 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CHRNB4P30926 498 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 APOBEC3AP31941 199 aaPredicted RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 OR2B8PP59922 312 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RAB11AP62491 216 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 MRPS11P82912 194 aaKnown RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 ARL16Q0P5N6 197 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PNRC1Q12796 327 aaPredicted RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 LRRC10Q5BKY1 277 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 FAM122CQ6P4D5 195 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RPRMQ9NS64 109 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CISD1Q9NZ45 108 aaKnown RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 FOXA2Q9Y261 457 aaPredicted RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 ZNF257Q9Y2Q1 563 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 GYPAP02724 150 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CD3EP07766 207 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 BCL2P10415 239 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 FOLR2P14207 255 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CCL8P80075 99 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 LTC4SQ16873 150 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TMEM249Q2WGJ8 235 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CT45A1Q5HYN5 189 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 ZNF787Q6DD87 383 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 OR8G2PQ6IF36 304 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RBMS3Q6XE24 437 aaKnown RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TCF23Q7RTU1 214 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CT45A3Q8NHU0 189 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RCC1LQ96I51 464 aaKnown RBP12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 ZNF714Q96N38 554 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CCL13Q99616 98 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 RSG1Q9BU20 258 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 DYNLRB1Q9NP97 96 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TMEM106BQ9NUM4 274 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TMEM140Q9NV12 185 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 FKBP11Q9NYL4 201 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 PRNDQ9UKY0 176 aa12□□□□□ -0.49
HLA-DPA1-242ENST00000419277 SPENQ96T58 3664 aaKnown RBP11.99□□□□□ -0.49
HLA-DPA1-242ENST00000419277 A0A087WWC5 75 aa11.99□□□□□ -0.49
HLA-DPA1-242ENST00000419277 TRBV23-1A0A0A0MS06 115 aa11.99□□□□□ -0.49
HLA-DPA1-242ENST00000419277 CTXND1A0A1B0GTU2 59 aa11.99□□□□□ -0.49
HLA-DPA1-242ENST00000419277 LOC102723971A0A1B0GUV8 181 aa11.99□□□□□ -0.49
HLA-DPA1-242ENST00000419277 B4DEV8 164 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms