RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 KIR2DS1A0A191URI9 304 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 C15orf65H3BRN8 121 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 SFT2D2O95562 160 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 HBZP02008 142 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 GAPDHP04406 335 aaKnown RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 OR5H8P0DN80 308 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 HIST1H1BP16401 226 aaKnown RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 KIR2DS4P43632 304 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 KIR2DS1Q14954 304 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 CLEC2AQ6UVW9 174 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 HEPN1Q6WQI6 88 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 OR8B3Q8NGG8 313 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 NEIL1Q96FI4 390 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 C2orf50Q96LR7 162 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 YPEL4Q96NS1 127 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 OR8B2Q96RD0 313 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 C20orf24Q9BUV8 137 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 NECAP2Q9NVZ3 263 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 PLA2G2EQ9NZK7 142 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 OR1A1Q9P1Q5 309 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 CLN8Q9UBY8 286 aa12.79□□□□□ -0.36
SHMT2-202ENST00000414700 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
SHMT2-202ENST00000414700 A0A1W2PPE2 198 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 ARG1P05089 322 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 SNCAP37840 140 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CD81P60033 236 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 GUK1Q16774 197 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 DEFB113Q30KQ7 82 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 UTF1Q5T230 341 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 TMEM200BQ69YZ2 307 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CLDND2Q8NHS1 167 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 VWC2LB2RUY7 222 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 UMAD1C9J7I0 102 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 ADAP1O75689 374 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CGB3P0DN86 165 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CGB7P0DN87 165 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CCL3L1P16619 93 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 IL2RGP31785 369 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 RAB32Q13637 225 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 SSX2Q16385 188 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 LTC4SQ16873 150 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 C17orf58Q2M2W7 97 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CR1LQ2VPA4 569 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 ACTBL2Q562R1 376 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 AADACL3Q5VUY0 350 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 CDPF1Q6NVV7 123 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 LURAP1Q96LR2 239 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 PIMREGQ9BSJ6 248 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 KCNIP1Q9NZI2 227 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 OR6C3Q9NZP0 311 aa12.78□□□□□ -0.36
SHMT2-202ENST00000414700 ITPR3Q14573 2671 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 IGHV3-43A0A0B4J1X8 118 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 IGHV3-43DP0DP04 118 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 FCGR2CP31995 323 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 SPCS3P61009 180 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 LMO4P61968 165 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 GNMTQ14749 295 aa12.77□□□□□ -0.37
SHMT2-202ENST00000414700 ZNF2Q9BSG1 426 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-202ENST00000414700 PARP12Q9H0J9 701 aaKnown RBP12.77□□□□□ -0.37
SHMT2-202ENST00000414700 TRGV10A0A0A0MS01 117 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 C22orf46C9J442 243 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 MMP23AO75900 390 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 JTBO76095 146 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 GZMHP20718 246 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 PKIAP61925 76 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 GNB2P62879 340 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 MIDNQ504T8 468 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 FAM185AQ8N0U4 392 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 OR52L2PQ8NGH6 319 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 TMEM230Q96A57 120 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 GALMQ96C23 342 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 CABLES2Q9BTV7 478 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-202ENST00000414700 NCOR1P1Q9H4R4 102 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 CALYQ9NYX4 217 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 hADV38S2A0JD32 116 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 SEC14L6B5MCN3 397 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 OR2C1O95371 312 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 IGHV3-7P01780 117 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 ZFP36P26651 326 aaKnown RBP12.76□□□□□ -0.37
SHMT2-202ENST00000414700 DDTP30046 118 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 NPY4RP50391 375 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 NDUFA6P56556 154 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 S100A10P60903 97 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 IL15RAQ13261 267 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 SLC9A3R2Q15599 337 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 CLEC12BQ2HXU8 276 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 LBHQ53QV2 105 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-202ENST00000414700 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 TERB2Q8NHR7 220 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 SSX3Q99909 188 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-202ENST00000414700 BEX4Q9NWD9 120 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-202ENST00000414700 GPR132Q9UNW8 380 aa12.76□□□□□ -0.37
SHMT2-202ENST00000414700 ZFHX3Q15911 3703 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms