RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 TNFSF4P23510 183 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 PPP1CCP36873 323 aaKnown RBP10.96□□□□□ -0.66
LITAF-203ENST00000413364 ERVK11-1P61568 191 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 RHOGP84095 191 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 CHD3Q12873 2000 aaKnown RBP10.96□□□□□ -0.66
LITAF-203ENST00000413364 SP6Q3SY56 376 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 ZNF506Q5JVG8 444 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 TCF24Q7RTU0 167 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 FAM219AQ8IW50 185 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 RBMXL3Q8N7X1 1067 aaKnown RBP10.96□□□□□ -0.66
LITAF-203ENST00000413364 LRTM2Q8N967 370 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 RDH5Q92781 318 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 MRPL24Q96A35 216 aaKnown RBP10.96□□□□□ -0.66
LITAF-203ENST00000413364 ZNF48Q96MX3 618 aaPredicted RBP10.96□□□□□ -0.66
LITAF-203ENST00000413364 TXN2Q99757 166 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 SMPXQ9UHP9 88 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 ATP23Q9Y6H3 246 aa10.96□□□□□ -0.66
LITAF-203ENST00000413364 CUL9Q8IWT3 2517 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 ZNF320A2RRD8 509 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 C3orf80F5H4A9 247 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 HS3ST1O14792 307 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 DEGS1O15121 323 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 CECR9P0C854 216 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 Q6P435 159 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 CYB561D1Q8N8Q1 229 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 OR11L1Q8NGX0 322 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 TMEM106BQ9NUM4 274 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 BET1LQ9NYM9 111 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 UQCR10Q9UDW1 63 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 TUBD1Q9UJT1 453 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 MUC6Q6W4X9 2439 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 C22orf46C9J442 243 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 TUSC2O75896 110 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 ZNF154Q13106 437 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 ZNF880Q6PDB4 577 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 LIAT1Q6ZQX7 453 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 ASCL5Q7RTU5 278 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 GPR146Q96CH1 333 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 FUT9Q9Y231 359 aa10.95□□□□□ -0.66
LITAF-203ENST00000413364 IGKV1-6A0A0C4DH72 117 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 K7EM74 188 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 K7N7A8 449 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 YPEL1O60688 119 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 LGI3Q8N145 548 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 FAM169BQ8N8A8 192 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 FAM213BQ8TBF2 198 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 RBMXL1Q96E39 390 aaKnown RBP10.94□□□□□ -0.66
LITAF-203ENST00000413364 C18orf12Q96KH6 178 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 YPEL2Q96QA6 119 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 PAM16Q9Y3D7 125 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 WIPI2Q9Y4P8 454 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 SHANK1Q9Y566 2161 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 GVINP1Q7Z2Y8 2422 aa10.94□□□□□ -0.66
LITAF-203ENST00000413364 MPPED1O15442 326 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 CNN1P51911 297 aaKnown RBP10.93□□□□□ -0.66
LITAF-203ENST00000413364 PRRX1P54821 245 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 RAB11AP62491 216 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 PAFAH1B2P68402 229 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 C20orf204Q6ZNR8 217 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 S100A7AQ86SG5 101 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 OR4S2Q8NH73 311 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 MSI2Q96DH6 328 aaKnown RBP10.93□□□□□ -0.66
LITAF-203ENST00000413364 FAM215AQ9Y5M1 114 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 IGHV1-18A0A0C4DH31 117 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.93□□□□□ -0.66
LITAF-203ENST00000413364 MAP1LC3B2A6NCE7 125 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 PROB1E7EW31 1015 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 CDIPTO14735 213 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 PHF1O43189 567 aaPredicted RBP10.93□□□□□ -0.66
LITAF-203ENST00000413364 DEDDO75618 318 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 KITLGP21583 273 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 MDH2P40926 338 aaKnown RBP10.93□□□□□ -0.66
LITAF-203ENST00000413364 ACTL10Q5JWF8 245 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 TPTE2P1Q5T6R2 138 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 MAP1LC3BQ9GZQ8 125 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 HIPK2Q9H2X6 1198 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 CDC42EP3Q9UKI2 254 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 SSUH2Q9Y2M2 353 aa10.93□□□□□ -0.66
LITAF-203ENST00000413364 GRPP07492 148 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 ICAM4Q14773 271 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 ZNF146Q15072 292 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 PSG3Q16557 428 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 SMIM3Q9BZL3 60 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 CXXC4Q9H2H0 198 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 SLC25A15Q9Y619 301 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 ESPL1Q14674 2120 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 C3orf85A0A1B0GTC6 90 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 CORTO00230 105 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 SLC33A1O00400 549 aaPredicted RBP10.92□□□□□ -0.66
LITAF-203ENST00000413364 MLNRO43193 412 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 OR2H2O95918 312 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 SRPXP78539 464 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 RBPJQ06330 500 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 VAMP3Q15836 100 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 SPIN3Q5JUX0 258 aa10.92□□□□□ -0.66
LITAF-203ENST00000413364 PCSK4Q6UW60 755 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms