RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 ERVFC1-1P60608 527 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 BSXQ3C1V8 233 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 DRAM1Q8N682 238 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
PTPRF-204ENST00000412568 CALYQ9NYX4 217 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 CCDC168Q8NDH2 2452 aa9.48□□□□□ -0.89
PTPRF-204ENST00000412568 DOCK11Q5JSL3 2073 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 HOXB1P14653 301 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-204ENST00000412568 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-204ENST00000412568 ORM2P19652 201 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 HOXA4Q00056 320 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-204ENST00000412568 LINC00596Q86U02 117 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 RNF126Q9BV68 326 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 SH3BGRL3Q9H299 93 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 SIRT7Q9NRC8 400 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 ZNF835Q9Y2P0 537 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 IGKV1D-13A0A0B4J2D9 117 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 LYNX1G3V0Z9 82 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 COX7A2P2O60397 106 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 ZNF737O75373 536 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 S1PR2O95136 353 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 IGKV1-13P0DP09 117 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 LYNX1P0DP58 116 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM78BQ5VT40 261 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 ETFRF1Q6IPR1 90 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM89BQ8N5H3 189 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 PLPPR1Q8TBJ4 325 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 SNRNP40Q96DI7 357 aaKnown RBP9.47□□□□□ -0.89
PTPRF-204ENST00000412568 TMEM204Q9BSN7 226 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 ANKRD11Q6UB99 2663 aaPredicted RBP9.47□□□□□ -0.89
PTPRF-204ENST00000412568 PQLC2LA1A4F0 135 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A10PA6NDY2 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A18PA6NE21 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A16PA6NEW6 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A20PA6NIJ5 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A8PA6NJQ4 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A7PA6NKC0 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A22PA8MWA6 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A12PA8MX19 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A5PA8MXJ8 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A23PA8MXZ1 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A15PP0C7V4 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A13PP0C7W8 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A14PP0C7W9 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 FAM90A24PP0C7X0 464 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 SELLP14151 372 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 UBE2G1P62253 170 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 RPL39P5Q59GN2 51 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 OR13A1Q8NGR1 328 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 TMEM56Q96MV1 263 aa9.47□□□□□ -0.89
PTPRF-204ENST00000412568 IGKV3D-15A0A087WSY6 115 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 KIAA1324LA8MWY0 1029 aaPredicted RBP9.46□□□□□ -0.89
PTPRF-204ENST00000412568 M0R143 59 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 ARF6P62330 175 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 SELENOHQ8IZQ5 122 aaKnown RBP9.46□□□□□ -0.89
PTPRF-204ENST00000412568 FAM57AQ8TBR7 257 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 ZCCHC14Q8WYQ9 949 aaKnown RBP9.46□□□□□ -0.89
PTPRF-204ENST00000412568 FLYWCH2Q96CP2 140 aaKnown RBP9.46□□□□□ -0.89
PTPRF-204ENST00000412568 NAT8BQ9UHF3 227 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 PRRX1P54821 245 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 PLA2G2CQ5R387 149 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 ASCL5Q7RTU5 278 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 BIVMQ86UB2 503 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 KLHDC1Q8N7A1 406 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 OR8B3Q8NGG8 313 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 OR2T10Q8NGZ9 312 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 OR8B2Q96RD0 313 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 GP6Q9HCN6 339 aa9.46□□□□□ -0.89
PTPRF-204ENST00000412568 NCOA6Q14686 2063 aaPredicted RBP9.46□□□□□ -0.9
PTPRF-204ENST00000412568 H0Y980 276 aa9.46□□□□□ -0.9
PTPRF-204ENST00000412568 J3QR06 171 aa9.46□□□□□ -0.9
PTPRF-204ENST00000412568 OR10A7Q8NGE5 316 aa9.46□□□□□ -0.9
PTPRF-204ENST00000412568 BLNKQ8WV28 456 aa9.46□□□□□ -0.9
PTPRF-204ENST00000412568 RAB29O14966 203 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 ACAA1P09110 424 aaPredicted RBP9.45□□□□□ -0.9
PTPRF-204ENST00000412568 ACP7Q6ZNF0 438 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 MUC15Q8N387 334 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 OR4C5Q8NGB2 326 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 ZNF714Q96N38 554 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 HS3ST6Q96QI5 342 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 TMEM147Q9BVK8 224 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 HIF1ANQ9NWT6 349 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 MMP9P14780 707 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 FCER1GP30273 86 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 AMTP48728 403 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 CDC34P49427 236 aaPredicted RBP9.45□□□□□ -0.9
PTPRF-204ENST00000412568 HIST3H3Q16695 136 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 SAXO1Q8IYX7 474 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 CORO2AQ92828 525 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 FUT9Q9Y231 359 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 RNF115Q9Y4L5 304 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 K7N7A8 449 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 ZG16O60844 167 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 SS18L1O75177 396 aaPredicted RBP9.45□□□□□ -0.9
PTPRF-204ENST00000412568 WT1P19544 449 aaPredicted RBP9.45□□□□□ -0.9
PTPRF-204ENST00000412568 NRN1LQ496H8 165 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 GPR61Q9BZJ8 451 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 CACFD1Q9UGQ2 172 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 IGHV1-18A0A0C4DH31 117 aa9.45□□□□□ -0.9
PTPRF-204ENST00000412568 FCN1O00602 326 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms