RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 IGKV1-13P0DP09 117 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 HNF1AP20823 631 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 ADIRFQ15847 76 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 BTNL8Q6UX41 500 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 ZNF497Q6ZNH5 498 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 C9orf62Q8N4C0 152 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 OR4F5Q8NH21 305 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 RPUSD4Q96CM3 377 aaKnown RBP7.61□□□□□ -1.19
LIG4-202ENST00000405925 OR4F4Q96R69 305 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 GNG7O60262 68 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 MGST1P10620 155 aaKnown RBP7.61□□□□□ -1.19
LIG4-202ENST00000405925 NHLH2Q02577 135 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 LY6EQ16553 131 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 ATP6V1FQ16864 119 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 MMD2Q8IY49 270 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 SELENOHQ8IZQ5 122 aaKnown RBP7.61□□□□□ -1.19
LIG4-202ENST00000405925 TMEM252Q8N6L7 170 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 OR4C13Q8NGP0 309 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 PARP11Q9NR21 331 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 PLSCR2Q9NRY7 297 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 SONP18583 2426 aaKnown RBP7.61□□□□□ -1.19
LIG4-202ENST00000405925 TRBV6-7A0A0A0MS04 114 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 NUDT19A8MXV4 375 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 MBPP02686 304 aaPredicted RBP7.61□□□□□ -1.19
LIG4-202ENST00000405925 ORM2P19652 201 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 S100A2P29034 98 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 NPBWR1P48145 328 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 TMEM187Q14656 261 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 SIGIRRQ6IA17 410 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 HCP5Q6MZN7 132 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 SLC24A4Q8NFF2 622 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 OR52M1Q8NGK5 317 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 OR2T6Q8NHC8 308 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 FRZBQ92765 325 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 DPM3Q9P2X0 92 aa7.61□□□□□ -1.19
LIG4-202ENST00000405925 TMEM178BH3BS89 294 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 TOX4O94842 621 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 PRB1P04280 392 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 CLEC3BP05452 202 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 MIDNQ504T8 468 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 ATP5SQ99766 215 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 C19orf12Q9NSK7 152 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 EPG5Q9HCE0 2579 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 M0QZ24 198 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 ACAA1P09110 424 aaPredicted RBP7.6□□□□□ -1.19
LIG4-202ENST00000405925 GRNP28799 593 aaKnown RBP7.6□□□□□ -1.19
LIG4-202ENST00000405925 EFNA4P52798 201 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 TMEM65Q6PI78 240 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 SSC4DQ8WTU2 575 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 HS3ST6Q96QI5 342 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 C7orf69Q9H7B7 122 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 TIMM8BQ9Y5J9 83 aaPredicted RBP7.6□□□□□ -1.19
LIG4-202ENST00000405925 CSN1S1P47710 185 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 SPCS3P61009 180 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 NHLRC3Q5JS37 347 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 TNFSF18Q9UNG2 199 aa7.6□□□□□ -1.19
LIG4-202ENST00000405925 MAP1LC3B2A6NCE7 125 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 C17orf98A8MV24 154 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 OR2A4O95047 310 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 IGLV1-44P01699 117 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 BTCP35070 178 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 LYZP61626 148 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 UBE2G1P62253 170 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 C11orf91Q3C1V1 193 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 Q5BKY6 102 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 DHRS7BQ6IAN0 325 aaPredicted RBP7.59□□□□□ -1.19
LIG4-202ENST00000405925 C5orf24Q7Z6I8 188 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 CD177Q8N6Q3 437 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 BORCS7Q96B45 105 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 OR2A7Q96R45 310 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 MAP1LC3BQ9GZQ8 125 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 PRELID1Q9Y255 219 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 K7EQM0 130 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 OR10J4P0C629 311 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 MPZP25189 248 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 DHRS11Q6UWP2 260 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 Q6ZR03 302 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 Q8NA96 180 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 OR10G4Q8NGN3 311 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 OR10G9Q8NGN4 311 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 OR10G7Q8NGN6 311 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 ZNF835Q9Y2P0 537 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 MDFIC2A0A1B0GVS7 189 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 KBTBD11O94819 623 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 UCP1P25874 307 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 PLA2G5P39877 138 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 CDC34P49427 236 aaPredicted RBP7.59□□□□□ -1.19
LIG4-202ENST00000405925 HSPE1P61604 102 aaKnown RBP7.59□□□□□ -1.19
LIG4-202ENST00000405925 QRFPP83859 136 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 ANGPTL6Q8NI99 470 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 GALNT14Q96FL9 552 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 RTBDNQ9BSG5 229 aaPredicted RBP7.59□□□□□ -1.19
LIG4-202ENST00000405925 TCF19Q9Y242 345 aa7.59□□□□□ -1.19
LIG4-202ENST00000405925 PRUNE2Q8WUY3 3088 aa7.59□□□□□ -1.2
LIG4-202ENST00000405925 USF1P22415 310 aaPredicted RBP7.58□□□□□ -1.2
LIG4-202ENST00000405925 RUNX1Q01196 453 aa7.58□□□□□ -1.2
LIG4-202ENST00000405925 BTN1A1Q13410 526 aa7.58□□□□□ -1.2
LIG4-202ENST00000405925 C20orf204Q6ZNR8 217 aa7.58□□□□□ -1.2
LIG4-202ENST00000405925 BPIFCQ8NFQ6 507 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms