RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ZDHHC16Q969W1 377 aa6.48□□□□□ -1.37
HDAC9-201ENST00000401921 MUCL1Q96DR8 90 aa6.48□□□□□ -1.37
HDAC9-201ENST00000401921 OR5B12Q96R08 314 aa6.48□□□□□ -1.37
HDAC9-201ENST00000401921 CABLES2Q9BTV7 478 aa6.48□□□□□ -1.37
HDAC9-201ENST00000401921 SPRY4Q9C004 299 aa6.48□□□□□ -1.37
HDAC9-201ENST00000401921 GAB2Q9UQC2 676 aa6.48□□□□□ -1.37
HDAC9-201ENST00000401921 TGIF2-C20orf24A0A0A6YYL0 155 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 A0A0U1RQK1 487 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 C17orf98A8MV24 154 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 IGKV1-39P01597 117 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 IGKV1D-39P04432 117 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ICAM4Q14773 271 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 GABRA6Q16445 453 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 BATFQ16520 125 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ZNF880Q6PDB4 577 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 Q6ZS49 121 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 C9orf106Q8NAJ2 232 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 Q8NFD4 153 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 OR8G5Q8NG78 346 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 PARD6AQ9NPB6 346 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 KIAA1324LA8MWY0 1029 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 SIAH2O43255 324 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 CRYAAP02489 173 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 CECR9P0C854 216 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 DEFA4P12838 97 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 TDGF1P3P51864 188 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 GAGE1Q13065 139 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 PDLIM3Q53GG5 364 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 Q6ZT83 130 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 TAF15Q92804 592 aaKnown RBP eCLIP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 RCC1LQ96I51 464 aaKnown RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 METRNQ9UJH8 293 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 CHD3Q12873 2000 aaKnown RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 TMEM238LA0A1B0GVL6 79 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ODAMA1E959 279 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 CBY3A6NI87 242 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 HSPB1P04792 205 aaKnown RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 BCL2P10415 239 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 RPL29P47914 159 aaKnown RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ZNF585BQ52M93 769 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 VKORC1L1Q8N0U8 176 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ZNF525Q8N782 197 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ZNF645Q8N7E2 425 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 OR10G4Q8NGN3 311 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 OR10G9Q8NGN4 311 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 OR10G7Q8NGN6 311 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 OR13A1Q8NGR1 328 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 CLDND2Q8NHS1 167 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 LEAP2Q969E1 77 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 LSM10Q969L4 123 aaKnown RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 ENY2Q9NPA8 101 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 AURKAIP1Q9NWT8 199 aaPredicted RBP6.47□□□□□ -1.37
HDAC9-201ENST00000401921 RNF115Q9Y4L5 304 aa6.47□□□□□ -1.37
HDAC9-201ENST00000401921 APC2O95996 2303 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BKO60814 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 TRGC2P03986 189 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BJP06899 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 FTH1P19P0C7X4 201 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BOP23527 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 PRDX2P32119 198 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BBP33778 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 PLA2G5P39877 138 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BDP58876 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BCP62807 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 SRSF7Q16629 238 aaKnown RBP eCLIP6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST2H2BEQ16778 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.46□□□□□ -1.37
HDAC9-201ENST00000401921 FAM201AQ5SY85 155 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 NCR3LG1Q68D85 454 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HEPN1Q6WQI6 88 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 ZNF705AQ6ZN79 300 aaPredicted RBP6.46□□□□□ -1.37
HDAC9-201ENST00000401921 C1orf87Q8N0U7 546 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 ZADH2Q8N4Q0 377 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BHQ93079 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 PINX1Q96BK5 328 aaKnown RBP6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BNQ99877 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 HIST1H2BMQ99879 126 aa6.46□□□□□ -1.37
HDAC9-201ENST00000401921 ABCA4P78363 2273 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 ZNF318Q5VUA4 2279 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 A0A1W2PPQ1 181 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 FAM157AC9JC47 383 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 CLDN34H7C241 214 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 CIDEAO60543 219 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 OPN1MWP04001 364 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 OPN1MW2P0DN77 364 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 OPN1MW3P0DN78 364 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 COX5AP20674 150 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 MOGAT3Q86VF5 341 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 ZNRF1Q8ND25 227 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 LOXL4Q96JB6 756 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 FAM210BQ96KR6 192 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 WDR61Q9GZS3 305 aaKnown RBP6.46□□□□□ -1.38
HDAC9-201ENST00000401921 GAL3ST2Q9H3Q3 398 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 SMDT1Q9H4I9 107 aa6.46□□□□□ -1.38
HDAC9-201ENST00000401921 A8MXE2 369 aa6.45□□□□□ -1.38
HDAC9-201ENST00000401921 IQCF6A8MYZ5 107 aa6.45□□□□□ -1.38
HDAC9-201ENST00000401921 MLNRO43193 412 aa6.45□□□□□ -1.38
HDAC9-201ENST00000401921 TMEM41BQ5BJD5 291 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms