RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 CX3CL1P78423 397 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 ZBTB34Q8NCN2 500 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 KCNE1BA0A087WTH5 132 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 TMEM189A5PLL7 270 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 ZG16O60844 167 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 SPATA45Q537H7 98 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 C2orf83Q53S99 150 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 LDLRAD3Q86YD5 345 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 CGB7P0DN87 165 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 WDR38Q5JTN6 314 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 GPR82Q96P67 336 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 STARD10Q9Y365 291 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 BSPH1Q075Z2 132 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 AMER3Q8N944 861 aa9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 FAM110DQ8TAY7 271 aaPredicted RBP9.48□□□□□ -0.89
CACNA1C-210ENST00000399606 IGHV3-11P01762 117 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 FXYD3Q14802 87 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 MRPL24Q96A35 216 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 ABHD14BQ96IU4 210 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 RHOVQ96L33 236 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 PLPP2O43688 288 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 SLC25A1P53007 311 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 SP5Q6BEB4 398 aaPredicted RBP9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 FAM159AQ6UWV7 190 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 DTX2Q86UW9 622 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 SLC6A13Q9NSD5 602 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 IDI2-AS1Q9NZ38 188 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 RNASE6Q93091 150 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 WDR34Q96EX3 536 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 ATG2BQ96BY7 2078 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 ZNF98A6NK75 572 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 HYPMO75409 117 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 CEACAM4O75871 244 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 POLR2GP62487 172 aaKnown RBP eCLIP9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 MUC21A0A0G2JKD1 596 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 MUC21A0A140T8X8 626 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 TMEM33P57088 247 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 MPV17LQ2QL34 196 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 LAIR2Q6ISS4 152 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 CBLN3Q6UW01 205 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 FAM57AQ8TBR7 257 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 CTAG2O75638 210 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 TNFRSF14Q92956 283 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 ISOC2Q96AB3 205 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 MAP1LC3AQ9H492 121 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 TMEM160Q9NX00 188 aa9.47□□□□□ -0.89
CACNA1C-210ENST00000399606 A0A0B4J2E0 115 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 A0A1B0GX12 115 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 C5orf47Q569G3 176 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 MRPL16Q9NX20 251 aaKnown RBP9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 LOC102723996A0A087X1L8 192 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 A0A0G2JLM5 398 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 MMP9P14780 707 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 TBR1Q16650 682 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 OR1K1Q8NGR3 316 aa9.46□□□□□ -0.89
CACNA1C-210ENST00000399606 H3BTX0 84 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 KBTBD11O94819 623 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 SPSB2Q99619 263 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 WNT10AQ9GZT5 417 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF107Q9UII5 783 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 GREB1LQ9C091 1923 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 CEACAM18A8MTB9 384 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 SLC25A45Q8N413 288 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 SPSB4Q96A44 273 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 HBZP02008 142 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 FGF5P12034 268 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 DSCR9P59020 149 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 ERVK11-1P61568 191 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 CD200R1LQ6Q8B3 271 aa9.46□□□□□ -0.9
CACNA1C-210ENST00000399606 IGHV3-64A0A075B6Q5 118 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 NDUFS5O43920 106 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 BHLHA9Q7RTU4 235 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 GCSAMQ8N6F7 178 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF501Q96CX3 271 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 ZNF625Q96I27 306 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 MPTX1A8MV57 137 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 LEAP2Q969E1 77 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 PAXXQ9BUH6 204 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 NPIPB11E5RHQ5 1161 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 SLC25A20O43772 301 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 CTSDP07339 412 aaPredicted RBP9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 PIGYQ3MUY2 71 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 ANXA2RQ3ZCQ2 193 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 MTFP1Q9UDX5 166 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 TNFRSF18Q9Y5U5 241 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 A0A1W2PQF6 199 aa9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 RPL35AP18077 110 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 CSRP1P21291 193 aaKnown RBP9.45□□□□□ -0.9
CACNA1C-210ENST00000399606 FRRS1LQ9P0K9 344 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms