RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 LINC00473A8K010 186 aa16.33■□□□□ 0.2
RCCD1-201ENST00000394258 KITLGP21583 273 aa16.33■□□□□ 0.2
RCCD1-201ENST00000394258 TAS2R60P59551 318 aa16.33■□□□□ 0.2
RCCD1-201ENST00000394258 SPRNQ5BIV9 151 aa16.33■□□□□ 0.2
RCCD1-201ENST00000394258 C1orf162Q8NEQ5 155 aaPredicted RBP16.33■□□□□ 0.2
RCCD1-201ENST00000394258 AKAP13Q12802 2813 aa16.33■□□□□ 0.2
RCCD1-201ENST00000394258 GALR2O43603 387 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-201ENST00000394258 FAM234AQ9H0X4 552 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 CEBPZOSA8MTT3 80 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 ZG16O60844 167 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 CATR1Q13166 79 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 TAF15Q92804 592 aaKnown RBP eCLIP16.32■□□□□ 0.2
RCCD1-201ENST00000394258 PACRGQ96M98 296 aaPredicted RBP16.32■□□□□ 0.2
RCCD1-201ENST00000394258 ATG101Q9BSB4 218 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 SMG1Q96Q15 3661 aaKnown RBP16.32■□□□□ 0.2
RCCD1-201ENST00000394258 TSTD3H0UI37 97 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 IGLV1-44P01699 117 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 PRDX2P32119 198 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 PKIAP61925 76 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 MBD3L1Q8WWY6 194 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 LURAP1Q96LR2 239 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 HIPK2Q9H2X6 1198 aa16.32■□□□□ 0.2
RCCD1-201ENST00000394258 CISD1Q9NZ45 108 aaKnown RBP16.32■□□□□ 0.2
RCCD1-201ENST00000394258 A0A087WWC5 75 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 MAP1LC3B2A6NCE7 125 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 LRRC30A6NM36 301 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 DEFA4P12838 97 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 MSMO1Q15800 293 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 SLC35E3Q7Z769 313 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 RPP25LQ8N5L8 163 aaKnown RBP16.31■□□□□ 0.2
RCCD1-201ENST00000394258 PSMG3Q9BT73 122 aaPredicted RBP16.31■□□□□ 0.2
RCCD1-201ENST00000394258 MAP1LC3BQ9GZQ8 125 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 ZNF292O60281 2723 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 AHRRA9YTQ3 701 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 M0R1B8 84 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 CGAP01215 116 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 TMEM41BQ5BJD5 291 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 ACSM6Q6P461 480 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.31■□□□□ 0.2
RCCD1-201ENST00000394258 HSPB7Q9UBY9 170 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 WASF3Q9UPY6 502 aa16.31■□□□□ 0.2
RCCD1-201ENST00000394258 EIF4EBP1Q13541 118 aaPredicted RBP16.3■□□□□ 0.2
RCCD1-201ENST00000394258 TMEM14EPQ6UXP3 125 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 H2BFWTQ7Z2G1 175 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 ZBTB34Q8NCN2 500 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 PRR7Q8TB68 274 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 PCNX1Q96RV3 2341 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 ZNRF1Q8ND25 227 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 GATAD1Q8WUU5 269 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 DCAF16Q9NXF7 216 aa16.3■□□□□ 0.2
RCCD1-201ENST00000394258 ATMQ13315 3056 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 FAM201AQ5SY85 155 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 ZADH2Q8N4Q0 377 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 SLC25A22Q9H936 323 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 GNG12Q9UBI6 72 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 SLC25A15Q9Y619 301 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 IGKV1D-17A0A075B6S4 117 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 SPINT2O43291 252 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
RCCD1-201ENST00000394258 ZNF318Q5VUA4 2279 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 MBNL2Q5VZF2 373 aaKnown RBP16.29■□□□□ 0.2
RCCD1-201ENST00000394258 NCR3LG1Q68D85 454 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 DTD1Q8TEA8 209 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 LHX4Q969G2 390 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 FAM210BQ96KR6 192 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 HIST1H2BLQ99880 126 aa16.29■□□□□ 0.2
RCCD1-201ENST00000394258 FAM90A26D6RGX4 464 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 SERF2P84101 59 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 TFF3Q07654 80 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 AGMATQ9BSE5 352 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 PIEZO2Q9H5I5 2752 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 ZNF705GA8MUZ8 300 aaPredicted RBP16.28■□□□□ 0.2
RCCD1-201ENST00000394258 IFNL4K9M1U5 179 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 SPRY3O43610 288 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 ZNF737O75373 536 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 P0C879 139 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 G0S2P27469 103 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 EDDM3BP56851 147 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 P2RY6Q15077 328 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 SLC39A9Q9NUM3 307 aa16.28■□□□□ 0.2
RCCD1-201ENST00000394258 SMCO3A2RU48 225 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 C15orf65H3BRN8 121 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 TCAPO15273 167 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 CLEC12BQ2HXU8 276 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 MOGAT3Q86VF5 341 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 OR2V2Q96R30 315 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 HCFC1P51610 2035 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 ACACAQ13085 2346 aa16.27■□□□□ 0.2
RCCD1-201ENST00000394258 PROP1O75360 226 aa16.27■□□□□ 0.19
RCCD1-201ENST00000394258 ZNF474Q6S9Z5 364 aaPredicted RBP16.27■□□□□ 0.19
RCCD1-201ENST00000394258 VKORC1L1Q8N0U8 176 aa16.27■□□□□ 0.19
RCCD1-201ENST00000394258 OR10G4Q8NGN3 311 aa16.27■□□□□ 0.19
RCCD1-201ENST00000394258 SDF2L1Q9HCN8 221 aa16.27■□□□□ 0.19
RCCD1-201ENST00000394258 MARCH11A6NNE9 402 aa16.26■□□□□ 0.19
RCCD1-201ENST00000394258 FCGR3BO75015 233 aa16.26■□□□□ 0.19
RCCD1-201ENST00000394258 CLDN14O95500 239 aa16.26■□□□□ 0.19
RCCD1-201ENST00000394258 CD81P60033 236 aa16.26■□□□□ 0.19
RCCD1-201ENST00000394258 UTF1Q5T230 341 aa16.26■□□□□ 0.19
RCCD1-201ENST00000394258 LEAP2Q969E1 77 aa16.26■□□□□ 0.19
RCCD1-201ENST00000394258 SIRT7Q9NRC8 400 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms