RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 H0YGG7 62 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CXCL12P48061 93 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 BAHD1Q8TBE0 780 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 SLC37A2Q8TED4 501 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 HARBI1Q96MB7 349 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 SRSF8Q9BRL6 282 aaKnown RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM147Q9BVK8 224 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 SH2D2AQ9NP31 389 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 MMP17Q9ULZ9 603 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 SPTA1P02549 2419 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 A0A1W2PS18 150 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 GALR2O43603 387 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CT45A6P0DMU7 189 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CT45A5P0DMU8 189 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CT45A7P0DMV0 189 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CTLA4P16410 223 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 IL15RAQ13261 267 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 PSG3Q16557 428 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CT45A1Q5HYN5 189 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM164Q5U3C3 297 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 OR1F12Q8NHA8 337 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 CT45A3Q8NHU0 189 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 NAT6Q93015 286 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 MRGPRFQ96AM1 343 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 VSIRQ9H7M9 311 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 HEYLQ9NQ87 328 aaPredicted RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 DNAJB12Q9NXW2 375 aaKnown RBP6.54□□□□□ -1.36
VTI1A-201ENST00000393077 ZNF236Q9UL36 1845 aa6.54□□□□□ -1.36
VTI1A-201ENST00000393077 KIR2DS5A0A0G2JLQ3 304 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 A0A0G2JNG1 304 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 KIR2DS3K7RE56 304 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 SRSF10O75494 262 aaKnown RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 PPYP01298 95 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 COL9A1P20849 921 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 KIR2DS5Q14953 304 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 FAM166AQ6J272 317 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 PRSS57Q6UWY2 283 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 SHISA6Q6ZSJ9 500 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 LHFPL1Q86WI0 220 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 LRRC75AQ8NAA5 344 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 OR2V2Q96R30 315 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 PHF7Q9BWX1 381 aaPredicted RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM222Q9H0R3 208 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 F11RQ9Y624 299 aaKnown RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 TTC28Q96AY4 2481 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 TNRC6AQ8NDV7 1962 aaKnown RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 HEATR1Q9H583 2144 aaKnown RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 KLRC4-KLRK1H3BQV0 150 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 J3QR06 171 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 MS4A5Q9H3V2 200 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 PTRH2Q9Y3E5 179 aaKnown RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 ALPK3Q96L96 1907 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 MYO16Q9Y6X6 1858 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 A0A0J9YY10 115 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 HSPB6O14558 160 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 NGFRP08138 427 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 IGFBP2P18065 325 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 CSN1S1P47710 185 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 YPEL5P62699 121 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 RHOBP62745 196 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 ESPL1Q14674 2120 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 ETDBQ3ZM63 59 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 BHLHA15Q7RTS1 189 aaPredicted RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 STPG3Q8N7X2 389 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 LSM10Q969L4 123 aaKnown RBP6.53□□□□□ -1.36
VTI1A-201ENST00000393077 SPXQ9BT56 116 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 TXNIPQ9H3M7 391 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 NPVFQ9HCQ7 196 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 PIGLQ9Y2B2 252 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 GPR179Q6PRD1 2367 aa6.53□□□□□ -1.36
VTI1A-201ENST00000393077 PSMB11A5LHX3 300 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 FAM181BA6NEQ2 426 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 LAMTOR5O43504 91 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 SNCGO76070 127 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 APOMO95445 188 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 NAPSAO96009 420 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 SRFP11831 508 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 GABRG2P18507 467 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 RBM11P57052 281 aaKnown RBP6.52□□□□□ -1.36
VTI1A-201ENST00000393077 YPEL3P61236 119 aaPredicted RBP6.52□□□□□ -1.36
VTI1A-201ENST00000393077 DMWDQ09019 674 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 FXYD3Q14802 87 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 TRAT1Q6PIZ9 186 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 TMEM92Q6UXU6 159 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 OR2A1Q8NGT9 310 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 TPPP3Q9BW30 176 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 VCX2Q9H322 139 aa6.52□□□□□ -1.36
VTI1A-201ENST00000393077 KIR2DS1A0A191URI9 304 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 H3BRM9 83 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 KLF7O75840 302 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-201ENST00000393077 KIR2DS4P43632 304 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 RPL15P61313 204 aaKnown RBP6.52□□□□□ -1.37
VTI1A-201ENST00000393077 KIR2DS1Q14954 304 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 TXNDC17Q9BRA2 123 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 SOX21Q9Y651 276 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-201ENST00000393077 UNC13CQ8NB66 2214 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms