RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 IGHV1-18A0A0C4DH31 117 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 LIPFP07098 398 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 FOXF2Q12947 444 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 OR8I2Q8N0Y5 310 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 STXBP6Q8NFX7 210 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 TUBD1Q9UJT1 453 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 LY6G6EA0A0G2JKS1 128 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 MPDU1O75352 247 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 F12P00748 615 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-202ENST00000392770 SMIM8Q96KF7 97 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 TOLLIPQ9H0E2 274 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 U3KQA8 63 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 HYPMO75409 117 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 PGA5P0DJD9 388 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 PDLIM4P50479 330 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 FOXG1P55316 489 aaPredicted RBP14.03□□□□□ -0.16
SCN3B-202ENST00000392770 OR2T10Q8NGZ9 312 aa14.03□□□□□ -0.16
SCN3B-202ENST00000392770 A0A0A6YYD4 124 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 A0A0B4J293 547 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 PROB1E7EW31 1015 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 SRSF6Q13247 344 aaKnown RBP14.02□□□□□ -0.16
SCN3B-202ENST00000392770 C2orf68Q2NKX9 166 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 DHRS11Q6UWP2 260 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 OR1L6Q8NGR2 347 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 PLPPR1Q8TBJ4 325 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 OR4C12Q96R67 309 aa14.02□□□□□ -0.16
SCN3B-202ENST00000392770 SEC14L6B5MCN3 397 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 USF1P22415 310 aaPredicted RBP14.02□□□□□ -0.17
SCN3B-202ENST00000392770 KNTC1P50748 2209 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 TRBV23-1A0A0A0MS06 115 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 CAMPP49913 170 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 ATP5J2P56134 94 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 MIC13Q5XKP0 118 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 WDR73Q6P4I2 378 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 OR4C13Q8NGP0 309 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 VOPP1Q96AW1 172 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 MFSD2BA6NFX1 497 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 HSBP1O75506 76 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 RNF212Q495C1 297 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 PAQR4Q8N4S7 273 aaPredicted RBP14.02□□□□□ -0.17
SCN3B-202ENST00000392770 DCTN5Q9BTE1 182 aa14.02□□□□□ -0.17
SCN3B-202ENST00000392770 AURKAIP1Q9NWT8 199 aaPredicted RBP14.02□□□□□ -0.17
SCN3B-202ENST00000392770 REG1AP05451 166 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 MDS2Q8NDY4 140 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 P01737 135 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 TBR1Q16650 682 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 CYB561D1Q8N8Q1 229 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 SUMO1P63165 101 aaKnown RBP14.01□□□□□ -0.17
SCN3B-202ENST00000392770 NRIP2Q9BQI9 281 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 FBLN5Q9UBX5 448 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 RND3P61587 244 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 FAM90A1Q86YD7 464 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 CORTO00230 105 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 OR2J3O76001 311 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 B3GALT5-AS1P59052 145 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 RANP62826 216 aaKnown RBP14.01□□□□□ -0.17
SCN3B-202ENST00000392770 TCF19Q9Y242 345 aa14.01□□□□□ -0.17
SCN3B-202ENST00000392770 IGKV3-7A0A075B6H7 116 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 IGSF23A1L1A6 192 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 LINC00869P0C866 280 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 ZNF146Q15072 292 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 WDR31Q8NA23 367 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 MRPL37Q9BZE1 423 aaKnown RBP14□□□□□ -0.17
SCN3B-202ENST00000392770 TM4SF5O14894 197 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 HELZP42694 1942 aaKnown RBP14□□□□□ -0.17
SCN3B-202ENST00000392770 RD3LP0DJH9 198 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 RNF151Q2KHN1 245 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 C1QTNF12Q5T7M4 302 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 C17orf100A8MU93 164 aa14□□□□□ -0.17
SCN3B-202ENST00000392770 PNRC2Q9NPJ4 139 aaKnown RBP14□□□□□ -0.17
SCN3B-202ENST00000392770 TFF1P04155 84 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 ZNF880Q6PDB4 577 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 J3KRW8 73 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 ERVH48-1M5A8F1 160 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 SNRPCP09234 159 aaKnown RBP13.99□□□□□ -0.17
SCN3B-202ENST00000392770 PCSK4Q6UW60 755 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 PTBP3O95758 552 aaKnown RBP13.99□□□□□ -0.17
SCN3B-202ENST00000392770 LDLRAD3Q86YD5 345 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 HEATR5BQ9P2D3 2071 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 KBTBD11-OT1A0A1B0GTJ5 212 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 SIGLEC5O15389 551 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 NHLRC3Q5JS37 347 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 WDR82Q6UXN9 313 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 OR10D4PQ8NGN7 298 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 ZNF430Q9H8G1 570 aaPredicted RBP13.99□□□□□ -0.17
SCN3B-202ENST00000392770 CLDN16Q9Y5I7 305 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 RND2P52198 227 aa13.99□□□□□ -0.17
SCN3B-202ENST00000392770 C17orf98A8MV24 154 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 UNQ5815/PRO19632Q6UWF5 114 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 SH2D7A6NKC9 451 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-202ENST00000392770 MPTX1A8MV57 137 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 COL8A1P27658 744 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 RNASE6Q93091 150 aaKnown RBP13.98□□□□□ -0.17
SCN3B-202ENST00000392770 SSBP3Q9BWW4 388 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-202ENST00000392770 PLAUP00749 431 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 GUCA2BQ16661 112 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 RBM14Q96PK6 669 aaKnown RBP13.98□□□□□ -0.17
SCN3B-202ENST00000392770 RARRES2Q99969 163 aa13.98□□□□□ -0.17
SCN3B-202ENST00000392770 SMDT1Q9H4I9 107 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms