RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 C4orf17Q53FE4 359 aa16.59■□□□□ 0.25
CSNK1D-203ENST00000392334 PINX1Q96BK5 328 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-203ENST00000392334 MRPL37Q9BZE1 423 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-203ENST00000392334 SDF2L1Q9HCN8 221 aa16.59■□□□□ 0.25
CSNK1D-203ENST00000392334 MYO18BQ8IUG5 2567 aa16.59■□□□□ 0.25
CSNK1D-203ENST00000392334 IGKV1-5P01602 117 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 ARL16Q0P5N6 197 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 TESK1Q15569 626 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 OR2B11Q5JQS5 317 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 SPNS3Q6ZMD2 512 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 HAPLN4Q86UW8 402 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 RCC1LQ96I51 464 aaKnown RBP16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 FAM210BQ96KR6 192 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 ZNF665Q9H7R5 613 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 LIN7CQ9NUP9 197 aaKnown RBP16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 OR1A1Q9P1Q5 309 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 OR14J1Q9UGF5 321 aa16.58■□□□□ 0.25
CSNK1D-203ENST00000392334 FAM208BQ5VWN6 2430 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 FAM90A26D6RGX4 464 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 TRGC2P03986 189 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 SPRNQ5BIV9 151 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 TMEM41BQ5BJD5 291 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 C1orf174Q8IYL3 243 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 HIST3H2BBQ8N257 126 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 CTDSP1Q9GZU7 261 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 CXXC4Q9H2H0 198 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 VAX2Q9UIW0 290 aa16.58■□□□□ 0.24
CSNK1D-203ENST00000392334 TRBV24-1A0A075B6N3 115 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 SPRY3O43610 288 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 IGHV3-13P01766 116 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 CD81P60033 236 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 ZNF585BQ52M93 769 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 C11orf53Q8IXP5 236 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 LINC00469Q8N7U9 141 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 WDR61Q9GZS3 305 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 VSIRQ9H7M9 311 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 ZFP92A6NM28 416 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 WNT9BO14905 357 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 PPP1R2P9O14990 202 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 IFNA1P01562 189 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 IZUMO4Q1ZYL8 232 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 POLDIP2Q9Y2S7 368 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 TIMM9Q9Y5J7 89 aa16.57■□□□□ 0.24
CSNK1D-203ENST00000392334 NDUFS6O75380 124 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 NXPH2O95156 264 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 OPN1MWP04001 364 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 METTL15P1P0C7V9 234 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 OPN1MW2P0DN77 364 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 OPN1MW3P0DN78 364 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 IAPPP10997 89 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 LCN15Q6UWW0 184 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 ZNF497Q6ZNH5 498 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 AGMATQ9BSE5 352 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 ROS1P08922 2347 aa16.56■□□□□ 0.24
CSNK1D-203ENST00000392334 TMEM210A6NLX4 147 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 PHOX2AO14813 284 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 PTBP3O95758 552 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 SSX7Q7RTT5 188 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 CENPVQ7Z7K6 275 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 PLCE1Q9P212 2302 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 TFF1P04155 84 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 TRGC1P0CF51 173 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 PGA5P0DJD9 388 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 CEBPDP49716 269 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 Q8IYB0 196 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 IL1F10Q8WWZ1 152 aa16.55■□□□□ 0.24
CSNK1D-203ENST00000392334 HCFC1P51610 2035 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 SOD3P08294 240 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 FBXL19-AS1Q494R0 122 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 LILRB2Q8N423 598 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 FRZBQ92765 325 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 NEUROG1Q92886 237 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 PLPPR2Q96GM1 343 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 MBNL3Q9NUK0 354 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 WIPI2Q9Y4P8 454 aa16.54■□□□□ 0.24
CSNK1D-203ENST00000392334 IGLV3-9A0A075B6K5 115 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 MAP1LC3B2A6NCE7 125 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 RNF212BA8MTL3 300 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 SIRPB1O00241 398 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 ERVK11-1P61568 191 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 WDR82Q6UXN9 313 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 TMEM14EPQ6UXP3 125 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 OR10D4PQ8NGN7 298 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 ITLN2Q8WWU7 325 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 TAF15Q92804 592 aaKnown RBP eCLIP16.53■□□□□ 0.246e-6■■□□□ 12.5
CSNK1D-203ENST00000392334 RNASE6Q93091 150 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 OR2V2Q96R30 315 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 OR4C12Q96R67 309 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 MAP1LC3BQ9GZQ8 125 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 PPP1R3CQ9UQK1 317 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 USP9XQ93008 2570 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 TRBV23-1A0A0A0MS06 115 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 OR4A8P0C604 315 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 SELENOVP59797 346 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 TFF3Q07654 80 aa16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 WDR25Q64LD2 544 aaPredicted RBP16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 ZCCHC24Q8N2G6 241 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-203ENST00000392334 ZNF383Q8NA42 475 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms