RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
SNX9-201ENST00000392185 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 HKR1P10072 659 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 FAM209AQ5JX71 171 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 ZNF474Q6S9Z5 364 aaPredicted RBP13.91□□□□□ -0.18
SNX9-201ENST00000392185 DBX2Q6ZNG2 339 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 ZNF561Q8N587 486 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 NRIP2Q9BQI9 281 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 RBKSQ9H477 322 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 DOCK11Q5JSL3 2073 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 GAPDHP04406 335 aaKnown RBP13.91□□□□□ -0.18
SNX9-201ENST00000392185 CT45A10P0DMU9 189 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 ZP3P21754 424 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 HABP2Q14520 560 aaPredicted RBP13.91□□□□□ -0.18
SNX9-201ENST00000392185 OR4P4Q8NGL7 312 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 OR1B1Q8NGR6 318 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 HTTP42858 3142 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 ZNF705GA8MUZ8 300 aaPredicted RBP13.91□□□□□ -0.18
SNX9-201ENST00000392185 ZNF735P0CB33 412 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 UQCC3Q6UW78 93 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 SLC24A4Q8NFF2 622 aa13.91□□□□□ -0.18
SNX9-201ENST00000392185 RNASE6Q93091 150 aaKnown RBP13.91□□□□□ -0.18
SNX9-201ENST00000392185 IGHV3OR16-10A0A075B7F0 116 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 A0A1W2PNU3 283 aaPredicted RBP13.9□□□□□ -0.18
SNX9-201ENST00000392185 TMEM218A2RU14 115 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 SEC11BP0C7V7 166 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 ARL3P36405 182 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 ECSCRQ19T08 205 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 HSD17B13Q7Z5P4 300 aaPredicted RBP13.9□□□□□ -0.18
SNX9-201ENST00000392185 PNKDQ8N490 385 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 THYN1Q9P016 225 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 MSRB2Q9Y3D2 182 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 TIMM9Q9Y5J7 89 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 A0A0G2JNJ9 132 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 ZNF729A6NN14 1252 aaPredicted RBP13.9□□□□□ -0.18
SNX9-201ENST00000392185 C17orf98A8MV24 154 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 DVL1O14640 695 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 LDLRAD4O15165 306 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 COX6B1P14854 86 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 RPL27AP46776 148 aaKnown RBP13.9□□□□□ -0.18
SNX9-201ENST00000392185 OR4C12Q96R67 309 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 RASL11BQ9BPW5 248 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 C1RLQ9NZP8 487 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 Q9UFV3 132 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 PCNX3Q9H6A9 2034 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 RAB19A4D1S5 217 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 ERVH48-1M5A8F1 160 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
SNX9-201ENST00000392185 ETFRF1Q6IPR1 90 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 POM121Q96HA1 1249 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 SLC25A15Q9Y619 301 aa13.9□□□□□ -0.18
SNX9-201ENST00000392185 GNG7O60262 68 aa13.9□□□□□ -0.19
SNX9-201ENST00000392185 GTF3AQ92664 365 aaKnown RBP13.9□□□□□ -0.19
SNX9-201ENST00000392185 WFIKKN1Q96NZ8 548 aa13.9□□□□□ -0.19
SNX9-201ENST00000392185 TLNRD1Q9H1K6 362 aa13.9□□□□□ -0.19
SNX9-201ENST00000392185 ZNF785A8K8V0 405 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 UBE2L3P68036 154 aaKnown RBP13.89□□□□□ -0.19
SNX9-201ENST00000392185 CD1BP29016 333 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 TNFRSF9Q07011 255 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 OR9G1Q8NH87 305 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 CHODLQ9H9P2 273 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 SLC45A2Q9UMX9 530 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 PSPNO60542 156 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 SPINK4O60575 86 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 RPL8P62917 257 aaKnown RBP13.89□□□□□ -0.19
SNX9-201ENST00000392185 SPNS3Q6ZMD2 512 aa13.89□□□□□ -0.19
SNX9-201ENST00000392185 YLPM1P49750 1951 aaKnown RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 IGKV3-7A0A075B6H7 116 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 MBD3L4A6NDZ8 208 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 MBD3L3A6NE82 208 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 MBD3L5A6NJ08 208 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 SRSF10O75494 262 aaKnown RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 NBL1P41271 181 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 FHITP49789 147 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 SPCS3P61009 180 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 HIST1H3AP68431 136 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 PSG5Q15238 335 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 SIGIRRQ6IA17 410 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 MYPOPQ86VE0 399 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 MBD3L2Q8NHZ7 208 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 LURAP1Q96LR2 239 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 AURKAIP1Q9NWT8 199 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 HTR1DP28221 377 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 SRP14P37108 136 aaKnown RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 GAMTQ14353 236 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 BAGE3Q86Y29 109 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 BAGE2Q86Y30 109 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 FAM24BQ8N5W8 94 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 GALNT14Q96FL9 552 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 CNN1P51911 297 aaKnown RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 ERVFC1-1P60608 527 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 TEPPQ6URK8 271 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 DHRS11Q6UWP2 260 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 UNQ6494/PRO21346Q6UXR6 183 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 H1FOOQ8IZA3 346 aaPredicted RBP13.88□□□□□ -0.19
SNX9-201ENST00000392185 ISOC2Q96AB3 205 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 TMEM204Q9BSN7 226 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 TCF19Q9Y242 345 aa13.88□□□□□ -0.19
SNX9-201ENST00000392185 ARFGEF3Q5TH69 2177 aa13.87□□□□□ -0.19
SNX9-201ENST00000392185 PAGE4O60829 102 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms