RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 OR2D3Q8NGH3 330 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 PLPPR1Q8TBJ4 325 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 SELLP14151 372 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 ZIC4Q8N9L1 334 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 MRPL13Q9BYD1 178 aaKnown RBP12.35□□□□□ -0.43
PSME4-201ENST00000389993 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
PSME4-201ENST00000389993 LOC105371242A0A075B767 164 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 HTR1DP28221 377 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 GGNQ86UU5 652 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 ERVFRD-1P60508 538 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 TUSC1Q2TAM9 212 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 OR1L6Q8NGR2 347 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 HEATR1Q9H583 2144 aaKnown RBP12.34□□□□□ -0.43
PSME4-201ENST00000389993 IGHV3OR16-12A0A075B7B8 117 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 C17orf98A8MV24 154 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 CLDN34H7C241 214 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 PHYHIPLQ96FC7 376 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 IGKV1D-8A0A087WSZ0 117 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 HSBP1O75506 76 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 B3GALNT1O75752 331 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 NDUFB4O95168 129 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 RPL27AP46776 148 aaKnown RBP12.34□□□□□ -0.43
PSME4-201ENST00000389993 TOMM20LQ6UXN7 152 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 KCNMB2Q9Y691 235 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 KIAA2026Q5HYC2 2103 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 TANC1Q9C0D5 1861 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 LOC102723996A0A087X1L8 192 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 IER3P46695 156 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 NUBP1P53384 320 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 FXYD3Q14802 87 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 FAM57AQ8TBR7 257 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 ZNF107Q9UII5 783 aaPredicted RBP12.34□□□□□ -0.43
PSME4-201ENST00000389993 ZNF716A6NP11 495 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 IGKV3-20P01619 116 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 RND2P52198 227 aa12.34□□□□□ -0.43
PSME4-201ENST00000389993 RBM14Q96PK6 669 aaKnown RBP12.34□□□□□ -0.43
PSME4-201ENST00000389993 MRPL37Q9BZE1 423 aaKnown RBP12.34□□□□□ -0.43
PSME4-201ENST00000389993 USF1P22415 310 aaPredicted RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 MRPL30Q8TCC3 161 aaKnown RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 Q8WTZ3 238 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 FDX2Q6P4F2 183 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 ZNF524Q96C55 264 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 PKIBQ9C010 78 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 HELTA6NFD8 242 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 MGPP08493 103 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 UNQ5815/PRO19632Q6UWF5 114 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 KIR3DL3Q8N743 410 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 FAM3BP58499 235 aaPredicted RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 PRR30Q53SZ7 412 aaPredicted RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 GAR1Q9NY12 217 aaKnown RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 LY86O95711 162 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 IFI6P09912 130 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 LINC00869P0C866 280 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 FCGR2BP31994 310 aaPredicted RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 RPL8P62917 257 aaKnown RBP12.33□□□□□ -0.44
PSME4-201ENST00000389993 TMEM45BQ96B21 275 aa12.33□□□□□ -0.44
PSME4-201ENST00000389993 PCNTO95613 3336 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 AKAP6Q13023 2319 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 LY6HO94772 140 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 KCNMB1Q16558 191 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 WBP1Q96G27 269 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 WFIKKN1Q96NZ8 548 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 RTBDNQ9BSG5 229 aaPredicted RBP12.32□□□□□ -0.44
PSME4-201ENST00000389993 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 NAT8Q9UHE5 227 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 TIMM23BQ5SRD1 257 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 SNRNP40Q96DI7 357 aaKnown RBP12.32□□□□□ -0.44
PSME4-201ENST00000389993 C1QTNF5Q9BXJ0 243 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 GATA2P23769 480 aaPredicted RBP12.32□□□□□ -0.44
PSME4-201ENST00000389993 PAXXQ9BUH6 204 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 LINC00470Q9BZP3 86 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1D-13A0A0B4J2D9 117 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 IGKV1-13P0DP09 117 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 GAS1P54826 345 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 DOCK7Q96N67 2140 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 IGHV1-18A0A0C4DH31 117 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 COL8A1P27658 744 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 TNFRSF9Q07011 255 aa12.32□□□□□ -0.44
PSME4-201ENST00000389993 MARS2Q96GW9 593 aaKnown RBP12.32□□□□□ -0.44
PSME4-201ENST00000389993 ROS1P08922 2347 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 F8VVB4 439 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 F8VWA3 439 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 ACACAQ13085 2346 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 CENPFP49454 3210 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 J3QRE1 110 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 CA11O75493 328 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 ZNF596Q8TC21 504 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 NMBP08949 121 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 RAMP3O60896 148 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 OR2A4O95047 310 aa12.31□□□□□ -0.44
PSME4-201ENST00000389993 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms