RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 HINT1P49773 126 aaPredicted RBP2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 C1orf195Q5TG92 126 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 LGALS9CQ6DKI2 356 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 SBSNQ6UWP8 590 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 C5orf46Q6UWT4 87 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 C10orf67Q8IYJ2 551 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR13C8Q8NGS7 320 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 RAB2BQ8WUD1 216 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 OR52B2Q96RD2 323 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 SPZ1Q9BXG8 430 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 HIVEP2P31629 2446 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 PLCH2O75038 1416 aa2.41□□□□□ -2.02
RNU6-40P-201ENST00000384254 NAV1Q8NEY1 1877 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 A0A1B0GW54 56 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 C21orf140B9A014 251 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 GNRH2O43555 120 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 DCTN3O75935 186 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 APOMO95445 188 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 REG1AP05451 166 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 P0DMU3 169 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 FAM231AP0DMU4 169 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 FAM231CP0DMU5 169 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 XCL1P47992 114 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 AGTRAPQ6RW13 159 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 GID4Q8IVV7 300 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 SLC35F6Q8N357 371 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 OR2T27Q8NH04 317 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 SFRP2Q96HF1 295 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 CCL13Q99616 98 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 KRTAP4-3Q9BYR4 195 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 FAM96AQ9H5X1 160 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 HRASLSQ9HDD0 168 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 TAAR3PQ9P1P4 343 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 ATG2BQ96BY7 2078 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 CHD5Q8TDI0 1954 aa2.4□□□□□ -2.03
RNU6-40P-201ENST00000384254 PCNX2A6NKB5 2137 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 MAP3K5Q99683 1374 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 DICER1Q9UPY3 1922 aaKnown RBP2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 MUC21A0A0G2JKD1 596 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 MUC21A0A140T8X8 626 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 A0A1W2PQD3 144 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 ZNF189O75820 626 aaPredicted RBP2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 NPYP01303 97 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 CALB1P05937 261 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 ALOX5APP20292 161 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 CD24P25063 80 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 TAS2R20P59543 309 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 CCDC122Q5T0U0 273 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 OR10K2Q6IF99 312 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 CD200R1LQ6Q8B3 271 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 Q6ZS52 159 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 SPATA12Q7Z6I5 190 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 OR4X2Q8NGF9 303 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 PTH2Q96A98 100 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 GNPNAT1Q96EK6 184 aaPredicted RBP2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 NMNAT3Q96T66 252 aa2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 KLK5Q9Y337 293 aaPredicted RBP2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 LSM5Q9Y4Y9 91 aaKnown RBP2.39□□□□□ -2.03
RNU6-40P-201ENST00000384254 C9JCJ5 164 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 TGOLN2O43493 480 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 DSCAMO60469 2012 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 AHSA1O95433 338 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 CCR7P32248 378 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 SLCO1A2P46721 670 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 ZNF140P52738 457 aaPredicted RBP2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 RBM11P57052 281 aaKnown RBP2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 FXYD7P58549 80 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 UBE2IP63279 158 aaKnown RBP2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 COQ5Q5HYK3 327 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 LHFPL1Q86WI0 220 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 ZNF283Q8N7M2 679 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 OR5J2Q8NH18 312 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 CLDND2Q8NHS1 167 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 SMCR5Q8TEV8 140 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 DIRAS2Q96HU8 199 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 TXNDC17Q9BRA2 123 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 GRIN2BQ13224 1484 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 EVC2Q86UK5 1308 aa2.38□□□□□ -2.03
RNU6-40P-201ENST00000384254 DHX57Q6P158 1386 aaKnown RBP2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 KIF15Q9NS87 1388 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 A0A087WUU8 490 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 MDFIC2A0A1B0GVS7 189 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 M0R036 132 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 COX7A2LO14548 114 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 TCL1AP56279 114 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 AP1S1P61966 158 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 FKBP1AP62942 108 aaKnown RBP2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 EMX1Q04741 257 aaPredicted RBP2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 FABP9Q0Z7S8 132 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 PABPC1L2AQ5JQF8 200 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 SAPCD1Q5SSQ6 148 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 C1orf194Q5T5A4 169 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 SLC35E3Q7Z769 313 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 PACRGLQ8N7B6 248 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 LHFPL5Q8TAF8 219 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 Q9BRP9 147 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 ZNF471Q9BX82 626 aaPredicted RBP2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 TTTY12Q9BZ98 90 aa2.37□□□□□ -2.03
RNU6-40P-201ENST00000384254 GPR84Q9NQS5 396 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms