RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ID4P47928 161 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 GLIPR1P48060 266 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 NMUP48645 174 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 MFAP4P55083 255 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 COTL1Q14019 142 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 Q5BKY6 102 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 SPSB4Q96A44 273 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 C19orf24Q9BVV8 132 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 IL17BQ9UHF5 180 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 ZDBF2Q9HCK1 2354 aa13.73□□□□□ -0.21
COL2A1-202ENST00000380518 CKS2P33552 79 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 UNQ5815/PRO19632Q6UWF5 114 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 OR1P1Q8NH06 330 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 TP53RKQ96S44 253 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM56-RWDD3S4R434 201 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 THY1P04216 161 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 OR4C13Q8NGP0 309 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 ELOVL1Q9BW60 279 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 LINC00470Q9BZP3 86 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
COL2A1-202ENST00000380518 TRAV30A0A087WSZ9 112 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 CD8AP01732 235 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 NAT1P18440 290 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 OR51G1Q8NGK1 321 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 AGAP20933 346 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 NUBP1P53384 320 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 DRAM1Q8N682 238 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 OR1N2Q8NGR9 330 aa13.72□□□□□ -0.21
COL2A1-202ENST00000380518 OR4C46A6NHA9 309 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 SS18L1O75177 396 aaPredicted RBP13.71□□□□□ -0.21
COL2A1-202ENST00000380518 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.21
COL2A1-202ENST00000380518 PMCHL1Q16048 86 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 DNM1P46Q6ZS02 220 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 TMEM186Q96B77 213 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 GUCD1Q96NT3 240 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 COL5A3P25940 1745 aaPredicted RBP13.71□□□□□ -0.21
COL2A1-202ENST00000380518 ZNF708P17019 499 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 TM4SF20Q53R12 229 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 PPP1R32Q7Z5V6 425 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 SH3BGRL3Q9H299 93 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 RNF115Q9Y4L5 304 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 ARL14EPLP0DKL9 152 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 ABHD12Q8N2K0 398 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 OR4B1Q8NGF8 309 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 RARRES2Q99969 163 aa13.71□□□□□ -0.21
COL2A1-202ENST00000380518 PPIAL4CA0A0B4J2A2 164 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 SHISA3A0PJX4 238 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 C17orf51A8MQB3 221 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 SYNGR3O43761 229 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 TIAF1O95411 115 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 PPIAL4GP0DN37 164 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 ZNF502Q8TBZ5 544 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 OR5P3Q8WZ94 311 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 GP6Q9HCN6 339 aa13.71□□□□□ -0.22
COL2A1-202ENST00000380518 NPIPB9F8W1W9 429 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 FCGR2BP31994 310 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-202ENST00000380518 ASPHD2Q6ICH7 369 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 ZNF738Q8NE65 137 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 MRPL18Q9H0U6 180 aaKnown RBP13.7□□□□□ -0.22
COL2A1-202ENST00000380518 TMEM177Q53S58 311 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 MARVELD3Q96A59 401 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 PSMG3Q9BT73 122 aaPredicted RBP13.7□□□□□ -0.22
COL2A1-202ENST00000380518 TRIOBPQ9H2D6 2365 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 CA2P00918 260 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 CRYBA2P53672 197 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 ABLIM2Q6H8Q1 611 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 OR51M1Q9H341 326 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 TDRD15B5MCY1 1934 aaKnown RBP13.7□□□□□ -0.22
COL2A1-202ENST00000380518 LEPROTL1O95214 131 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 BTF3P20290 206 aaKnown RBP13.7□□□□□ -0.22
COL2A1-202ENST00000380518 RPS20P60866 119 aaKnown RBP13.7□□□□□ -0.22
COL2A1-202ENST00000380518 TMEM74BQ9NUR3 256 aa13.7□□□□□ -0.22
COL2A1-202ENST00000380518 C2orf68Q2NKX9 166 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 Q6ZT83 130 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 MUC15Q8N387 334 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 EAF1Q96JC9 268 aaPredicted RBP13.69□□□□□ -0.22
COL2A1-202ENST00000380518 TIMP4Q99727 224 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 RECKO95980 971 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 WDR25Q64LD2 544 aaPredicted RBP13.69□□□□□ -0.22
COL2A1-202ENST00000380518 RTTNQ86VV8 2226 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 TGIF2-C20orf24A0A0A6YYL0 155 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 CRYBB3P26998 211 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 TMPRSS3P57727 454 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 ZNF146Q15072 292 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 LEAP2Q969E1 77 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 SDHCQ99643 169 aaPredicted RBP13.69□□□□□ -0.22
COL2A1-202ENST00000380518 hCG_38984A0A1B0GV85 526 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 SP9P0CG40 484 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 TFPI2P48307 235 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 GATAD1Q8WUU5 269 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 PARLQ9H300 379 aa13.69□□□□□ -0.22
COL2A1-202ENST00000380518 WNT9BO14905 357 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 AMY1AP04745 511 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 SYT8Q8NBV8 401 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 ZCCHC14Q8WYQ9 949 aaKnown RBP13.68□□□□□ -0.22
COL2A1-202ENST00000380518 NABP2Q9BQ15 211 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 TMEM250H0YL14 139 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 K7ERU9 68 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 SMUG1Q53HV7 270 aa13.68□□□□□ -0.22
COL2A1-202ENST00000380518 PCSK4Q6UW60 755 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms