RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 FRAS1Q86XX4 4008 aa13.39□□□□□ -0.27
PDLIM4-202ENST00000379018 TRBV6-6A0A0A6YYG2 114 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 BET1O15155 118 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 TUSC2O75896 110 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 DEFB114Q30KQ6 69 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 ACSM3Q53FZ2 586 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 SRSF12Q8WXF0 261 aaKnown RBP13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 CACNG8Q8WXS5 425 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 THRSPQ92748 146 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 CMSS1Q9BQ75 279 aaKnown RBP13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 C12orf4Q9NQ89 552 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 MGAT4AQ9UM21 535 aa13.38□□□□□ -0.27
PDLIM4-202ENST00000379018 EFCAB10A6NFE3 127 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 C2orf70A6NJV1 201 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 TMEM14DPA8MWL7 114 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 FOLR2P14207 255 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 AQP4P55087 323 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 WNT4P56705 351 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 TAGLNQ01995 201 aaKnown RBP13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 ZNF45Q02386 682 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 RTL8BQ17RB0 113 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 VMA21Q3ZAQ7 101 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 C1orf100Q5SVJ3 147 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 AHSA2Q719I0 299 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 URM1Q9BTM9 101 aaKnown RBP13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 LPAR5Q9H1C0 372 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 SDHAF2Q9NX18 166 aa13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 RBM7Q9Y580 266 aaKnown RBP13.37□□□□□ -0.27
PDLIM4-202ENST00000379018 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 OR2J3O76001 311 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 BPNT1O95861 308 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 IGHV3-23P01764 117 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 QRFPP83859 136 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 SLC16A13Q7RTY0 426 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 FAM223AQ8IWN6 122 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 C5orf30Q96GV9 206 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 ARHGAP5-AS1Q96IT6 56 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 OVOL2Q9BRP0 275 aa13.36□□□□□ -0.27
PDLIM4-202ENST00000379018 A0A0J9YWU9 116 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 TRDCB7Z8K6 153 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 OR2C1O95371 312 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 CRYZL1O95825 349 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 SRMP19623 302 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 KIR2DS2P43631 304 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 PRSS8Q16651 343 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 MRGPRG-AS1Q2M3A8 158 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 C10orf55Q5SWW7 151 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 TTC23Q5W5X9 447 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 RPP25LQ8N5L8 163 aaKnown RBP13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 SETD9Q8NE22 299 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 GGTLC1Q9BX51 225 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 PECRQ9BY49 303 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 PLGRKTQ9HBL7 147 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 S4R3C0 116 aa13.35□□□□□ -0.27
PDLIM4-202ENST00000379018 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 NUPR2A6NF83 97 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 ACTL6BO94805 426 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 SCAF4O95104 1147 aaKnown RBP13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 CD1AP06126 327 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 C15orf32Q32M92 178 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 HSD17B12Q53GQ0 312 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 TMEM177Q53S58 311 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 C19orf35Q6ZS72 473 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 CEACAM19Q7Z692 300 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 OR52B4Q8NGK2 314 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 OR6M1Q8NGM8 313 aa13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
PDLIM4-202ENST00000379018 FABP7O15540 132 aa13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 MRPS15P82914 257 aaKnown RBP13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 EWSR1Q01844 656 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 IGSF11Q5DX21 431 aa13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 TMEM61Q8N0U2 210 aa13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 MAFIPQ8WZ33 124 aa13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 PHYHIPQ92561 330 aa13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 ZC4H2Q9NQZ6 224 aa13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
PDLIM4-202ENST00000379018 LOC102724200A0A096LPH7 203 aaPredicted RBP13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 ZNF320A2RRD8 509 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 DEDDO75618 318 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 TMEM50BP56557 158 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 CLDN12P56749 244 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 UBE2KP61086 200 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 ZNF57Q68EA5 555 aaPredicted RBP13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 TEX45Q8NA69 505 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 BPIFB6Q8NFQ5 453 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 OR4A4PQ8NGN8 299 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 OR10J5Q8NHC4 309 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 DCUN1D5Q9BTE7 237 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 ZNF430Q9H8G1 570 aaPredicted RBP13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 HSF4Q9ULV5 492 aa13.32□□□□□ -0.28
PDLIM4-202ENST00000379018 TRBV9A0A0B4J1U6 114 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 HMX3A6NHT5 357 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 J3QRK9 145 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 GGCTO75223 188 aaKnown RBP13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 GSTT2P0CG29 244 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 GSTT2BP0CG30 244 aa13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 SAA1P0DJI8 122 aaPredicted RBP13.31□□□□□ -0.28
PDLIM4-202ENST00000379018 RRASP10301 218 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms