RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 HPRT1P00492 218 aa12.52□□□□□ -0.41
PRDM16-203ENST00000378391 CD74P04233 296 aa12.52□□□□□ -0.41
PRDM16-203ENST00000378391 MEF2CQ06413 473 aaPredicted RBP12.52□□□□□ -0.41
PRDM16-203ENST00000378391 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
PRDM16-203ENST00000378391 GUCD1Q96NT3 240 aa12.52□□□□□ -0.41
PRDM16-203ENST00000378391 HSPB7Q9UBY9 170 aa12.52□□□□□ -0.41
PRDM16-203ENST00000378391 A0A0J9YW62 118 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 C21orf140B9A014 251 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF665Q9H7R5 613 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 AURKAIP1Q9NWT8 199 aaPredicted RBP12.51□□□□□ -0.41
PRDM16-203ENST00000378391 MOGAT3Q86VF5 341 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 DOLPP1Q86YN1 238 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 KLK10O43240 276 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 OR4A8P0C604 315 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
PRDM16-203ENST00000378391 PSG4Q00888 419 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 SLC25A47Q6Q0C1 308 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 IGHV5-10-1A0A0J9YXX1 117 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 M0R296 226 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 SOX8P57073 446 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 OR5A1Q8NGJ0 315 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 SPTBP11277 2137 aa12.51□□□□□ -0.41
PRDM16-203ENST00000378391 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF735P0CB33 412 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 TNFSF10P50591 281 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 ZDHHC8Q9ULC8 765 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 SMIM10L1P0DMW3 83 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 RPL30P62888 115 aaKnown RBP12.5□□□□□ -0.41
PRDM16-203ENST00000378391 HIKESHIQ53FT3 197 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 OR4C13Q8NGP0 309 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 MYOZ3Q8TDC0 251 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 SMIM10Q96HG1 83 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 RASL11BQ9BPW5 248 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 MRPL37Q9BZE1 423 aaKnown RBP12.5□□□□□ -0.41
PRDM16-203ENST00000378391 IGKV1D-42A0A075B6H8 117 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF501Q96CX3 271 aaPredicted RBP12.5□□□□□ -0.41
PRDM16-203ENST00000378391 SCN2AQ99250 2005 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF716A6NP11 495 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 C5orf66Q9H5L9 145 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 ATG2BQ96BY7 2078 aa12.5□□□□□ -0.41
PRDM16-203ENST00000378391 HBZP02008 142 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 IGHV4-34P06331 123 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 PPP1CCP36873 323 aaKnown RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 MFAP2P55001 183 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 TMPRSS3P57727 454 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 SLC25A28Q96A46 364 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 CTHRC1Q96CG8 243 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 DOCK6Q96HP0 2047 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 RNF222A6NCQ9 220 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 IL11P20809 199 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 CXorf66Q5JRM2 361 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 C1orf174Q8IYL3 243 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 APCDD1LQ8NCL9 501 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 Q8WTZ3 238 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 NUTF2P61970 127 aaKnown RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 OR2I1PQ8NGU4 316 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 TAF15Q92804 592 aaKnown RBP eCLIP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 PRR32B1ATL7 298 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 NDUFB4O95168 129 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 RTN4RL2Q86UN3 420 aa12.49□□□□□ -0.41
PRDM16-203ENST00000378391 F11RQ9Y624 299 aaKnown RBP12.49□□□□□ -0.41
PRDM16-203ENST00000378391 ORM1P02763 201 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 DANCRP0C864 163 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 GEMIN7Q9H840 131 aaKnown RBP12.48□□□□□ -0.41
PRDM16-203ENST00000378391 PXMP4Q9Y6I8 212 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 APC2O95996 2303 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 MARS2Q96GW9 593 aaKnown RBP12.48□□□□□ -0.41
PRDM16-203ENST00000378391 TMEM70Q9BUB7 260 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 C1RLQ9NZP8 487 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 A8MWL6 223 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
PRDM16-203ENST00000378391 C3AR1Q16581 482 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF502Q8TBZ5 544 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 UFC1Q9Y3C8 167 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 H0YL77 283 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 SCTP09683 121 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 RND3P61587 244 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 MDP1Q86V88 176 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 SAP30LQ9HAJ7 183 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 EDA2RQ9HAV5 297 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 CARHSP1Q9Y2V2 147 aaKnown RBP12.48□□□□□ -0.41
PRDM16-203ENST00000378391 NPIPB9F8W1W9 429 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 RNASE1P07998 156 aaKnown RBP12.48□□□□□ -0.41
PRDM16-203ENST00000378391 KLK2P20151 261 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 ASCL5Q7RTU5 278 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 SFTPA2Q8IWL1 248 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 ZNF488Q96MN9 340 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 MRPL16Q9NX20 251 aaKnown RBP12.48□□□□□ -0.41
PRDM16-203ENST00000378391 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
PRDM16-203ENST00000378391 A1L4Q6 167 aa12.47□□□□□ -0.41
PRDM16-203ENST00000378391 LGALS7P47929 136 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms