RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 IQCF6A8MYZ5 107 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 RIGQ13278 110 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 TUBD1Q9UJT1 453 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 UFC1Q9Y3C8 167 aa15.22■□□□□ 0.03
CLSTN1-202ENST00000377298 TM4SF5O14894 197 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 LYPD3O95274 346 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 SSTR5P35346 364 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 LEAP2Q969E1 77 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 QTRT1Q9BXR0 403 aaKnown RBP15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 ALPK2Q86TB3 2170 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 KBTBD11O94819 623 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 LINC00869P0C866 280 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 FAM90A1Q86YD7 464 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 DRAM1Q8N682 238 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 C7orf77A4D0Y5 90 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 SMIM6P0DI80 62 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNF818PQ6ZRF7 136 aa15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNF430Q9H8G1 570 aaPredicted RBP15.21■□□□□ 0.03
CLSTN1-202ENST00000377298 ZNF98A6NK75 572 aa15.21■□□□□ 0.02
CLSTN1-202ENST00000377298 TCAPO15273 167 aa15.21■□□□□ 0.02
CLSTN1-202ENST00000377298 TNFRSF9Q07011 255 aa15.21■□□□□ 0.02
CLSTN1-202ENST00000377298 C1QL2Q7Z5L3 287 aa15.21■□□□□ 0.02
CLSTN1-202ENST00000377298 RTN4RQ9BZR6 473 aa15.21■□□□□ 0.02
CLSTN1-202ENST00000377298 C19orf35Q6ZS72 473 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 SNRNP40Q96DI7 357 aaKnown RBP15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 LYRM2Q9NU23 88 aaPredicted RBP15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 SEMA5BQ9P283 1151 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 MFAP4P55083 255 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 RUNX1Q01196 453 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 ZNF660Q6AZW8 331 aaPredicted RBP15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 NCOR1O75376 2440 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 TRAV30A0A087WSZ9 112 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 A0A1B0GTI1 187 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 S1PR2O95136 353 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 METTL26Q96S19 204 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 TLNRD1Q9H1K6 362 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 RANP62826 216 aaKnown RBP15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 LRRC75BQ2VPJ9 315 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 STPG3Q8N7X2 389 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 TXNDC17Q9BRA2 123 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 MFSD2BA6NFX1 497 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 SULT1A2P50226 295 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 MARVELD3Q96A59 401 aa15.2■□□□□ 0.02
CLSTN1-202ENST00000377298 E9PLN8 166 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 RHBDL1O75783 438 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 ATP5IP56385 69 aaPredicted RBP15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 NCMAPQ5T1S8 102 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 VKORC1Q9BQB6 163 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 C17orf100A8MU93 164 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 BMPR1BO00238 502 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 LY6EQ16553 131 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 TCF19Q9Y242 345 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 RIF1Q5UIP0 2472 aaKnown RBP15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 FAM74A7A6NL05 159 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 RND2P52198 227 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 DLK1P80370 383 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 RBM14Q96PK6 669 aaKnown RBP15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 MELTFP08582 738 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 PPOXP50336 477 aa15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 TAF15Q92804 592 aaKnown RBP eCLIP15.19■□□□□ 0.02
CLSTN1-202ENST00000377298 TMEM187Q14656 261 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 FAM216AQ8WUB2 273 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 OR10C1Q96KK4 312 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 NEUROG3Q9Y4Z2 214 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 SHISA3A0PJX4 238 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 PINLYPA6NC86 204 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 C12orf77C9JDV5 145 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 ZNF735P0CB33 412 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 TCL1AP56279 114 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 MESP1Q9BRJ9 268 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 SDK2Q58EX2 2172 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 BCL2P10415 239 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 MEF2CQ06413 473 aaPredicted RBP15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 IQCJQ1A5X6 159 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 GPHA2Q96T91 129 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 RSG1Q9BU20 258 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 TFPI2P48307 235 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 PQLC2Q6ZP29 291 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 AQP10Q96PS8 301 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 SPRR3Q9UBC9 169 aa15.18■□□□□ 0.02
CLSTN1-202ENST00000377298 EBLN2Q6P2I7 272 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 LDLRAD3Q86YD5 345 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 ANK1P16157 1881 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 SIP14410 1827 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 H3BQ15 152 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 CELA3BP08861 270 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 BPIFA4PQ86YQ2 179 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 DCTN5Q9BTE1 182 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 SSBP3Q9BWW4 388 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 PRO1933Q9H354 126 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 ZNF146Q15072 292 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 HKR1P10072 659 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 SOSTQ9BQB4 213 aa15.17■□□□□ 0.02
CLSTN1-202ENST00000377298 IGKV3D-15A0A087WSY6 115 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 WBP1Q96G27 269 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 SMIM8Q96KF7 97 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 SRD5A3Q9H8P0 318 aa15.16■□□□□ 0.02
CLSTN1-202ENST00000377298 ZG16O60844 167 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms