RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 LOC102723971A0A1B0GUV8 181 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 KIAA1324LA8MWY0 1029 aaPredicted RBP11.69□□□□□ -0.54
MSH5-202ENST00000375740 ZNF266Q14584 549 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 C1orf174Q8IYL3 243 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 ZNF665Q9H7R5 613 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
MSH5-202ENST00000375740 OOEPA6NGQ2 149 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 M0R143 59 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 DLEU1O43261 78 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 DFFBO76075 338 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 FGF8P55075 233 aaPredicted RBP11.68□□□□□ -0.54
MSH5-202ENST00000375740 SNIP1Q8TAD8 396 aaKnown RBP11.68□□□□□ -0.54
MSH5-202ENST00000375740 LRRC29Q8WV35 223 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 TMEM37Q8WXS4 190 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 SDF2L1Q9HCN8 221 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 ZFHX2Q9C0A1 2572 aaPredicted RBP11.68□□□□□ -0.54
MSH5-202ENST00000375740 PIGBOS1A0A0B4J2F0 54 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 HBZP02008 142 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 CRYABP02511 175 aaKnown RBP11.68□□□□□ -0.54
MSH5-202ENST00000375740 SLC25A6P12236 298 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 GABRA2P47869 451 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 ELLP55199 621 aaPredicted RBP11.68□□□□□ -0.54
MSH5-202ENST00000375740 GNB2P62879 340 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 PMS2P11Q13670 270 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 TIMM23BQ5SRD1 257 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 TPRX1Q8N7U7 411 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
MSH5-202ENST00000375740 CHD3Q12873 2000 aaKnown RBP11.68□□□□□ -0.54
MSH5-202ENST00000375740 GCGP01275 180 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
MSH5-202ENST00000375740 SMIM21Q3B7S5 101 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 CD177Q8N6Q3 437 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 LSM10Q969L4 123 aaKnown RBP11.67□□□□□ -0.54
MSH5-202ENST00000375740 VSIRQ9H7M9 311 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 CACNG5Q9UF02 275 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 RIF1Q5UIP0 2472 aaKnown RBP11.67□□□□□ -0.54
MSH5-202ENST00000375740 B4DEV8 164 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 TIMP3P35625 211 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 LIN7CQ9NUP9 197 aaKnown RBP11.67□□□□□ -0.54
MSH5-202ENST00000375740 TMEM242Q9NWH2 141 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 CBY1Q9Y3M2 126 aa11.67□□□□□ -0.54
MSH5-202ENST00000375740 EGR1P18146 543 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 RAB4AP20338 218 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 ERVFC1-1P60608 527 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 MZT1Q08AG7 82 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 LCN15Q6UWW0 184 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 SSX7Q7RTT5 188 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 ZNF295-AS1Q8N0V1 137 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 R3HDM4Q96D70 268 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 ELOVL1Q9BW60 279 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 AKAP13Q12802 2813 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 H3BP45 60 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 CD33P20138 364 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 PRDX2P32119 198 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 BAXQ07812 192 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 MRPL41Q8IXM3 137 aaKnown RBP11.66□□□□□ -0.54
MSH5-202ENST00000375740 ZNF645Q8N7E2 425 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 OR2D2Q9H210 308 aa11.66□□□□□ -0.54
MSH5-202ENST00000375740 CRYAAP02489 173 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 OPN1MWP04001 364 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 PFN1P07737 140 aaKnown RBP11.65□□□□□ -0.54
MSH5-202ENST00000375740 OPN1MW2P0DN77 364 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 OPN1MW3P0DN78 364 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 SPRNQ5BIV9 151 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 VHLLQ6RSH7 139 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 ZNF808Q8N4W9 903 aaPredicted RBP11.65□□□□□ -0.54
MSH5-202ENST00000375740 OR13A1Q8NGR1 328 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 RBMXL1Q96E39 390 aaKnown RBP11.65□□□□□ -0.54
MSH5-202ENST00000375740 C5orf30Q96GV9 206 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 POLR3KQ9Y2Y1 108 aaPredicted RBP11.65□□□□□ -0.54
MSH5-202ENST00000375740 KRTCAP3Q53RY4 240 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 C16orf82Q7Z2V1 217 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 FGFRL1Q8N441 504 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 RFESDQ8TAC1 157 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 FAM57AQ8TBR7 257 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 RAB40CQ96S21 281 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 DCTN5Q9BTE1 182 aa11.65□□□□□ -0.54
MSH5-202ENST00000375740 RNF212BA8MTL3 300 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 IGHV3-13P01766 116 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 CEACAM8P31997 349 aaPredicted RBP11.64□□□□□ -0.55
MSH5-202ENST00000375740 SSTR5P35346 364 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 RPL30P62888 115 aaKnown RBP11.64□□□□□ -0.55
MSH5-202ENST00000375740 MRPS11P82912 194 aaKnown RBP11.64□□□□□ -0.55
MSH5-202ENST00000375740 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
MSH5-202ENST00000375740 ZBTB34Q8NCN2 500 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 NINJ1Q92982 152 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 RSG1Q9BU20 258 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 FUT9Q9Y231 359 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 CACNA1DQ01668 2161 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 TGOLN2O43493 480 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 SYNGR2O43760 224 aa11.64□□□□□ -0.55
MSH5-202ENST00000375740 SCGB1D1O95968 90 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms