RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 GCSAMLQ5JQS6 135 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 TCF23Q7RTU1 214 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 H2BFWTQ7Z2G1 175 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 GALMQ96C23 342 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 DMDP11532 3685 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 RBFOX2O43251 390 aaKnown RBP eCLIP17.69■□□□□ 0.42
UPF3A-202ENST00000375299 RBMXL2O75526 392 aaKnown RBP17.69■□□□□ 0.42
UPF3A-202ENST00000375299 UBALD2Q8IYN6 164 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 OR52L2PQ8NGH6 319 aa17.69■□□□□ 0.42
UPF3A-202ENST00000375299 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 TMEM30CPA0ZSE6 113 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 C12orf77C9JDV5 145 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 RPL29P47914 159 aaKnown RBP17.68■□□□□ 0.42
UPF3A-202ENST00000375299 DCAF10Q5QP82 559 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 FAM53AQ6NSI3 398 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-202ENST00000375299 PCSK5Q92824 1860 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 C15orf62A8K5M9 175 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 ZNF25P17030 456 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-202ENST00000375299 PEAR1Q5VY43 1037 aaPredicted RBP17.68■□□□□ 0.42
UPF3A-202ENST00000375299 BTNL3Q6UXE8 466 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 OR2M7Q8NG81 312 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 SDSLQ96GA7 329 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 TAAR6Q96RI8 345 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 GP6Q9HCN6 339 aa17.68■□□□□ 0.42
UPF3A-202ENST00000375299 A0A1W2PPV4 95 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 M0QZK8 103 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 CDIPTO14735 213 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 MRPL52Q86TS9 123 aaKnown RBP17.67■□□□□ 0.42
UPF3A-202ENST00000375299 FAM173AQ9BQD7 235 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 TMEM106BQ9NUM4 274 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 SOX15O60248 233 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 HAND1O96004 215 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 HPRT1P00492 218 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 CD1BP29016 333 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 CEBPDP49716 269 aaPredicted RBP17.67■□□□□ 0.42
UPF3A-202ENST00000375299 ZNF705AQ6ZN79 300 aaPredicted RBP17.67■□□□□ 0.42
UPF3A-202ENST00000375299 TCTEX1D1Q8N7M0 179 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 ZDHHC11Q9H8X9 412 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 CHODLQ9H9P2 273 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
UPF3A-202ENST00000375299 GTF3C1Q12789 2109 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 NEURL1O76050 574 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 CER1O95813 267 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 KITLGP21583 273 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 EDDM3BP56851 147 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 SELENOTP62341 195 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 TXNDC17Q9BRA2 123 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 B4GALT7Q9UBV7 327 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 TRBV20OR9-2A0A075B6H5 130 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 GRIFINA4D1Z8 144 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 PSPNO60542 156 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 YPEL1O60688 119 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 TRIP6Q15654 476 aaKnown RBP17.66■□□□□ 0.42
UPF3A-202ENST00000375299 YPEL2Q96QA6 119 aa17.66■□□□□ 0.42
UPF3A-202ENST00000375299 USF3Q68DE3 2245 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 HBZP02008 142 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 TPPP2P59282 170 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 PAFAH1B2P68402 229 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 TOMM20LQ6UXN7 152 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 MDP1Q86V88 176 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 NINJ1Q92982 152 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 TP53TG3Q9ULZ0 132 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 OOEPA6NGQ2 149 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 RPLP1P05386 114 aaKnown RBP17.65■□□□□ 0.42
UPF3A-202ENST00000375299 TIMP3P35625 211 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 OR10G8Q8NGN5 311 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 C20orf144Q9BQM9 153 aa17.65■□□□□ 0.42
UPF3A-202ENST00000375299 IGHV3-64DA0A0J9YX35 117 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 TEX43Q6ZNM6 134 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 Q6ZWC4 215 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 PATZ1Q9HBE1 687 aaKnown RBP17.64■□□□□ 0.41
UPF3A-202ENST00000375299 FAM166BA8MTA8 275 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 TNFSF13O75888 250 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 DCAF12Q5T6F0 453 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 NANOS1Q8WY41 292 aaKnown RBP17.64■□□□□ 0.41
UPF3A-202ENST00000375299 QTRT1Q9BXR0 403 aaKnown RBP17.64■□□□□ 0.41
UPF3A-202ENST00000375299 PARD6AQ9NPB6 346 aa17.64■□□□□ 0.41
UPF3A-202ENST00000375299 ARL14EPLP0DKL9 152 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 ESDP10768 282 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 MAGEA5P43359 124 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 SSPNQ14714 243 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 TPTE2P1Q5T6R2 138 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 SLC35E4Q6ICL7 350 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 MCEMP1Q8IX19 187 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 HES7Q9BYE0 225 aa17.63■□□□□ 0.41
UPF3A-202ENST00000375299 SCO2A0A1W2PP80 73 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 MARCH11A6NNE9 402 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 LINC00473A8K010 186 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 MPDU1O75352 247 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 WISP2O76076 250 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 STAG3L2P0CL84 134 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 STAG3L3P0CL85 134 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 OPRK1P41145 380 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 LINC00310P59036 64 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 CT55Q8WUE5 264 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 BCL2L2Q92843 193 aaPredicted RBP17.62■□□□□ 0.41
UPF3A-202ENST00000375299 C12orf49Q9H741 205 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 TRAV9-1A0A075B6T8 112 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 CD33P20138 364 aa17.62■□□□□ 0.41
UPF3A-202ENST00000375299 OR1C1Q15619 314 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms