RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 KIAA1456Q9P272 454 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 hADV38S2A0JD32 116 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 FAM157AC9JC47 383 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 IGKV1-5P01602 117 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 ID3Q02535 119 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 LRRC10Q5BKY1 277 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 PRR27Q6MZM9 219 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 OR4S2Q8NH73 311 aa9.9□□□□□ -0.82
PACSIN1-202ENST00000374043 LYNX1G3V0Z9 82 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 ADH4P08319 380 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 LYNX1P0DP58 116 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 MST1LQ2TV78 715 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 CRIP3Q6Q6R5 217 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 PCSK4Q6UW60 755 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 ASCL4Q6XD76 172 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 RCC1LQ96I51 464 aaKnown RBP9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF251Q9BRH9 671 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 MRPL37Q9BZE1 423 aaKnown RBP9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 DCAF16Q9NXF7 216 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNRD1Q9P1U0 126 aa9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 SLC25A10Q9UBX3 287 aaPredicted RBP9.9□□□□□ -0.83
PACSIN1-202ENST00000374043 FOXI3A8MTJ6 420 aaPredicted RBP9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 HTD2P86397 168 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 Q6P435 159 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 EIF4E3Q8N5X7 224 aaKnown RBP9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 FAM210BQ96KR6 192 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 SCNM1Q9BWG6 230 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 NUP210LQ5VU65 1888 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 CEACAM18A8MTB9 384 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 C11orf94C9JXX5 98 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 SRSF4Q08170 494 aaKnown RBP9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 FAM78BQ5VT40 261 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 RAB24Q969Q5 203 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 HARBI1Q96MB7 349 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 ONECUT1Q9UBC0 465 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 SSUH2Q9Y2M2 353 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 TGIF2-C20orf24A0A0A6YYL0 155 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF320A2RRD8 509 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 PLAUP00749 431 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 BCL2P10415 239 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 CD1BP29016 333 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 OPRK1P41145 380 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 GCSAMLQ5JQS6 135 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 MRPL41Q8IXM3 137 aaKnown RBP9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 OR4P4Q8NGL7 312 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 OR10D4PQ8NGN7 298 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 SNRNP40Q96DI7 357 aaKnown RBP9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 MISP3Q96FF7 219 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 UHRF2Q96PU4 802 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 BARX1Q9HBU1 254 aaPredicted RBP9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 TMEM140Q9NV12 185 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 CLCF1Q9UBD9 225 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 ZDHHC8Q9ULC8 765 aa9.89□□□□□ -0.83
PACSIN1-202ENST00000374043 DUXBA0A1W2PPF3 345 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 HRASP01112 189 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 CCL3L1P16619 93 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 WDR31Q8NA23 367 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 FAM216AQ8WUB2 273 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 HIST1H2BAQ96A08 127 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 SNX22Q96L94 193 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 ANAPC10Q9UM13 185 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 MGAQ8IWI9 3026 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 CLDN34H7C241 214 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 PRB4P10163 310 aaPredicted RBP9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 FABP4P15090 132 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 TMEM41BQ5BJD5 291 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 C15orf54Q8N8G6 183 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 CA5BP1Q8WTZ4 195 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 C22orf15Q8WYQ4 148 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 FAM122AQ96E09 287 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 SLC35E1Q96K37 410 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF705FA8MVS1 300 aaPredicted RBP9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 J3QR06 171 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 PPIHO43447 177 aaKnown RBP9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 MBP02144 154 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 REG1AP05451 166 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF705DP0CH99 300 aaPredicted RBP9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF705BP0CI00 300 aaPredicted RBP9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 MYOD1P15172 320 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 SLC35E4Q6ICL7 350 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 CD177Q8N6Q3 437 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 COQ2Q96H96 371 aa9.88□□□□□ -0.83
PACSIN1-202ENST00000374043 NPY1RP25929 384 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 CD40P25942 277 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 B2MP61769 119 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 ERHP84090 104 aaKnown RBP9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 ARL16Q0P5N6 197 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 HFEQ30201 348 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 BSXQ3C1V8 233 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 DUX4L9Q6RFH8 374 aaPredicted RBP9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF474Q6S9Z5 364 aaPredicted RBP9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF66Q6ZN08 573 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 Q6ZR03 302 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 GATAD1Q8WUU5 269 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 ZNF355PQ9NSJ1 428 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 VAX2Q9UIW0 290 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 OR10J4P0C629 311 aa9.87□□□□□ -0.83
PACSIN1-202ENST00000374043 GLRXP35754 106 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms