RNA–Protein interactions for RNA: ENST00000372771.4

RLF-201, Transcript of rearranged L-myc fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RLF, Length 6,246 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLF-201ENST00000372771 FAM201AQ5SY85 155 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 RTN4RQ9BZR6 473 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 TPRP12270 2363 aaKnown RBP12.68□□□□□ -0.38
RLF-201ENST00000372771 A0A0B4J293 547 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 RPL13AP40429 203 aaKnown RBP12.68□□□□□ -0.38
RLF-201ENST00000372771 LOXL3P58215 753 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
RLF-201ENST00000372771 SSX8Q7RTT4 187 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 C1orf174Q8IYL3 243 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 SAXO1Q8IYX7 474 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 RAB24Q969Q5 203 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 TBX15Q96SF7 602 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 DIRC2Q96SL1 478 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 LTBP1Q14766 1721 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 MSGN1A6NI15 193 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 CD81P60033 236 aa12.68□□□□□ -0.38
RLF-201ENST00000372771 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 CALHM1Q8IU99 346 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 CCDC144NLQ6NUI1 221 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 PGPA6NDG6 321 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 HOXA4Q00056 320 aaPredicted RBP12.67□□□□□ -0.38
RLF-201ENST00000372771 WFIKKN1Q96NZ8 548 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 ARF6P62330 175 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 SHISA5Q8N114 240 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 ELOVL1Q9BW60 279 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 DIRC3C9JPN6 131 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 EGR1P18146 543 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 NUBP1P53384 320 aa12.67□□□□□ -0.38
RLF-201ENST00000372771 PEAR1Q5VY43 1037 aaPredicted RBP12.67□□□□□ -0.38
RLF-201ENST00000372771 TRBV23-1A0A0A0MS06 115 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 hCG_38984A0A1B0GV85 526 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 COX5BP10606 129 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 SPANXN1Q5VSR9 72 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 FLVCR1-AS1Q8TAF5 88 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 CORTO00230 105 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 ZNF735P0CB33 412 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 DANCRP0C864 163 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
RLF-201ENST00000372771 DHRS11Q6UWP2 260 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 NUDT16L1Q9BRJ7 211 aaKnown RBP12.66□□□□□ -0.38
RLF-201ENST00000372771 CLDN18P56856 261 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 COX19Q49B96 90 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 ZNF362Q5T0B9 420 aaPredicted RBP12.66□□□□□ -0.38
RLF-201ENST00000372771 C19orf48Q6RUI8 117 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 SCGB1D4Q6XE38 83 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 EIF4E3Q8N5X7 224 aaKnown RBP12.66□□□□□ -0.38
RLF-201ENST00000372771 OR4A5Q8NH83 315 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 HSPB9Q9BQS6 159 aa12.66□□□□□ -0.38
RLF-201ENST00000372771 SCN5AQ14524 2016 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 PRR19A6NJB7 356 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 PRR32B1ATL7 298 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.38
RLF-201ENST00000372771 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 CRIPAKQ8N1N5 446 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 LINC01560Q8TB33 94 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 ABCA7Q8IZY2 2146 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 IGHV3OR16-10A0A075B7F0 116 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 OR4C46A6NHA9 309 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 PGLYRP4Q96LB8 373 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 DICER1Q9UPY3 1922 aaKnown RBP12.65□□□□□ -0.38
RLF-201ENST00000372771 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 MC5RP33032 325 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 SMDT1Q9H4I9 107 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 CBY1Q9Y3M2 126 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 PPIAL4CA0A0B4J2A2 164 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 LOC390937A0A1W2PQ73 354 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 CELA3BP08861 270 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 PPIAL4GP0DN37 164 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 PKIAP61925 76 aa12.65□□□□□ -0.38
RLF-201ENST00000372771 MPDU1O75352 247 aa12.65□□□□□ -0.39
RLF-201ENST00000372771 HSPE1P61604 102 aaKnown RBP12.65□□□□□ -0.39
RLF-201ENST00000372771 FAM27E3Q08E93 113 aa12.65□□□□□ -0.39
RLF-201ENST00000372771 RNFT1Q5M7Z0 435 aa12.65□□□□□ -0.39
RLF-201ENST00000372771 AP5S1Q9NUS5 200 aa12.65□□□□□ -0.39
RLF-201ENST00000372771 HSPB8Q9UJY1 196 aa12.65□□□□□ -0.39
RLF-201ENST00000372771 JPT1Q9UK76 154 aa12.65□□□□□ -0.39
RLF-201ENST00000372771 TMEM189A5PLL7 270 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 CRYBB3P26998 211 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 RTBDNQ9BSG5 229 aaPredicted RBP12.64□□□□□ -0.39
RLF-201ENST00000372771 ZNF430Q9H8G1 570 aaPredicted RBP12.64□□□□□ -0.39
RLF-201ENST00000372771 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 LOC102724200A0A096LPH7 203 aaPredicted RBP12.64□□□□□ -0.39
RLF-201ENST00000372771 UMODP07911 640 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 CHRNA10Q9GZZ6 450 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 DOCK4Q8N1I0 1966 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 DYNLRB2Q8TF09 96 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 WDR90Q96KV7 1748 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 TMPRSS3P57727 454 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 CD8AP01732 235 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 HOXD4P09016 255 aaPredicted RBP12.64□□□□□ -0.39
RLF-201ENST00000372771 PTGDSP41222 190 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 LRRC75BQ2VPJ9 315 aa12.64□□□□□ -0.39
RLF-201ENST00000372771 MDC1Q14676 2089 aaKnown RBP12.63□□□□□ -0.39
RLF-201ENST00000372771 UNQ5815/PRO19632Q6UWF5 114 aa12.63□□□□□ -0.39
RLF-201ENST00000372771 Q6ZT83 130 aa12.63□□□□□ -0.39
RLF-201ENST00000372771 FADS6Q8N9I5 356 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms