RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CST7O76096 145 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 CD55P08174 381 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 OMGP23515 440 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 AKR1C1Q04828 323 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 VHLLQ6RSH7 139 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 TMEM182Q6ZP80 229 aaPredicted RBP11.66□□□□□ -0.54
LDB3-204ENST00000372066 Q6ZRM9 215 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 HSPB7Q9UBY9 170 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 GAB2Q9UQC2 676 aa11.66□□□□□ -0.54
LDB3-204ENST00000372066 FAM90A9PA6NNJ1 464 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 DNASE2O00115 360 aaPredicted RBP11.65□□□□□ -0.54
LDB3-204ENST00000372066 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 KIR2DS2P43631 304 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 RAB7AP51149 207 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 SRSF3P84103 164 aaKnown RBP11.65□□□□□ -0.54
LDB3-204ENST00000372066 EDDM3AQ14507 147 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 ALKBH2Q6NS38 261 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 C22orf34Q6ZV56 151 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 PUSL1Q8N0Z8 303 aaKnown RBP11.65□□□□□ -0.54
LDB3-204ENST00000372066 C5orf30Q96GV9 206 aa11.65□□□□□ -0.54
LDB3-204ENST00000372066 CIB3Q96Q77 187 aaPredicted RBP11.65□□□□□ -0.54
LDB3-204ENST00000372066 PSMG3Q9BT73 122 aaPredicted RBP11.65□□□□□ -0.54
LDB3-204ENST00000372066 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.65□□□□□ -0.54
LDB3-204ENST00000372066 VSTM5A8MXK1 200 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.55
LDB3-204ENST00000372066 HBE1P02100 147 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 IRF2P14316 349 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 TNFRSF1AP19438 455 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 CD80P33681 288 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 GPR12P47775 334 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 RAB2AP61019 212 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 TNFRSF9Q07011 255 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 GUK1Q16774 197 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 MORN2Q502X0 79 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 AKR1C8PQ5T2L2 129 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 STUMQ69YW2 141 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.64□□□□□ -0.55
LDB3-204ENST00000372066 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 AGMATQ9BSE5 352 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 TMEM231Q9H6L2 316 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 NGBQ9NPG2 151 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 GNG12Q9UBI6 72 aa11.64□□□□□ -0.55
LDB3-204ENST00000372066 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
LDB3-204ENST00000372066 FN1P02751 2386 aaKnown RBP11.64□□□□□ -0.55
LDB3-204ENST00000372066 JMJD1CQ15652 2540 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 LRRC30A6NM36 301 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 FAM157AC9JC47 383 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 NXPH3O95157 252 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 UBE2KP61086 200 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 RPL30P62888 115 aaKnown RBP11.63□□□□□ -0.55
LDB3-204ENST00000372066 ATP6V1FQ16864 119 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 Q3ZCU0 254 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 TEX36Q5VZQ5 186 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 SLC25A24Q6NUK1 477 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 TMEM217Q8N7C4 229 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 TPRX1Q8N7U7 411 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 SCGB1C1Q8TD33 95 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 ZNF665Q9H7R5 613 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 GCM1Q9NP62 436 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 CALYQ9NYX4 217 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 PSG11Q9UQ72 335 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 FAM96BQ9Y3D0 163 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 DYSFO75923 2080 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 DSCAMO60469 2012 aa11.63□□□□□ -0.55
LDB3-204ENST00000372066 IGHV3OR15-7A0A075B7D8 119 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 TSPAN4O14817 238 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 S1PR2O95136 353 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 TFF1P04155 84 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 CGB3P0DN86 165 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 CGB7P0DN87 165 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 LOXP28300 417 aaPredicted RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 GUCA2BQ16661 112 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 DHRS7BQ6IAN0 325 aaPredicted RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 H2BFWTQ7Z2G1 175 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 MDFIQ99750 246 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 TRGV10A0A0A0MS01 117 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 ZNF729A6NN14 1252 aaPredicted RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 C17orf98A8MV24 154 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 INAFM1C9JVW0 142 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 AGPAT2O15120 278 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 PPIHO43447 177 aaKnown RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 RAMP3O60896 148 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 HPRT1P00492 218 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 THBDP07204 575 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 IAPPP10997 89 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 SERF2P84101 59 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 HOXA4Q00056 320 aaPredicted RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 TMEM267Q0VDI3 215 aaPredicted RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 ZNF816Q0VGE8 651 aaPredicted RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 TMEM14EPQ6UXP3 125 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 WFDC8Q8IUA0 241 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 LILRB2Q8N423 598 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms