RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 OR2Z1Q8NG97 314 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 FAM213BQ8TBF2 198 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 ITLN1Q8WWA0 313 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 OR2V2Q96R30 315 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 C20orf24Q9BUV8 137 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 GCM1Q9NP62 436 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 HSF4Q9ULV5 492 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 PPP1R3CQ9UQK1 317 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 FBXO7Q9Y3I1 522 aa12.35□□□□□ -0.43
LMO4-201ENST00000370542 A0A087X0M5 115 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 TRAV1-1A0A0B4J248 108 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 A0A1B0GX30 115 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 ZNF732B4DXR9 585 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 ZNF728P0DKX0 622 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 BLVRBP30043 206 aaPredicted RBP12.34□□□□□ -0.43
LMO4-201ENST00000370542 RND2P52198 227 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 AKR1C8PQ5T2L2 129 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 OTPQ5XKR4 325 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 FIP1L1Q6UN15 594 aaKnown RBP12.34□□□□□ -0.43
LMO4-201ENST00000370542 Q6ZSR3 168 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 ZNF429Q86V71 674 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 LINC00346Q8IVM7 164 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 HPSE2Q8WWQ2 592 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 APOBEC3DQ96AK3 386 aaPredicted RBP12.34□□□□□ -0.43
LMO4-201ENST00000370542 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
LMO4-201ENST00000370542 ZNF2Q9BSG1 426 aaPredicted RBP12.34□□□□□ -0.43
LMO4-201ENST00000370542 C1QTNF5Q9BXJ0 243 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 SMIM3Q9BZL3 60 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 GPR84Q9NQS5 396 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 INSIG2Q9Y5U4 225 aa12.34□□□□□ -0.43
LMO4-201ENST00000370542 DOCK11Q5JSL3 2073 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HSD17B6O14756 317 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BKO60814 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 OPN1MWP04001 364 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BJP06899 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 WNT2P09544 360 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 OR5AC1P0C628 307 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 PPIAL4GP0DN37 164 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 OPN1MW2P0DN77 364 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 OPN1MW3P0DN78 364 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BOP23527 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BBP33778 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 MDH2P40926 338 aaKnown RBP12.33□□□□□ -0.44
LMO4-201ENST00000370542 OR3A4PP47883 348 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BDP58876 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BCP62807 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 DLK1P80370 383 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 PAX8Q06710 450 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 ZNF154Q13106 437 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 TAF9Q16594 264 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST2H2BEQ16778 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 KLF17Q5JT82 389 aaPredicted RBP12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.33□□□□□ -0.44
LMO4-201ENST00000370542 MRPL52Q86TS9 123 aaKnown RBP12.33□□□□□ -0.44
LMO4-201ENST00000370542 TMEM104Q8NE00 496 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 OR51E1Q8TCB6 317 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BHQ93079 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BNQ99877 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 HIST1H2BMQ99879 126 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 RNF150Q9ULK6 438 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 POLR1DQ9Y2S0 133 aa12.33□□□□□ -0.44
LMO4-201ENST00000370542 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 A0A0U1RQV5 110 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 IFITM10A6NMD0 228 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 CLDN34H7C241 214 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 MLNRO43193 412 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 SCGB1D2O95969 90 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 GCGP01275 180 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 PI3P19957 117 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 GABRR1P24046 479 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 GATA4P43694 442 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 HLA-DRB3P79483 266 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 JOSD1Q15040 202 aaPredicted RBP12.32□□□□□ -0.44
LMO4-201ENST00000370542 OR8G1Q15617 311 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 OR8B8Q15620 311 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 OR2T2Q6IF00 324 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 COMMD2Q86X83 199 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 OR2G3Q8NGZ4 309 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 MEGF10Q96KG7 1140 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 P2RX4Q99571 388 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 ACTR3CQ9C0K3 210 aaPredicted RBP12.32□□□□□ -0.44
LMO4-201ENST00000370542 BANF2Q9H503 90 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 WFDC1Q9HC57 220 aa12.32□□□□□ -0.44
LMO4-201ENST00000370542 PNRC2Q9NPJ4 139 aaKnown RBP12.32□□□□□ -0.44
LMO4-201ENST00000370542 DHRS7CA6NNS2 312 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 SDCBPO00560 298 aaPredicted RBP12.31□□□□□ -0.44
LMO4-201ENST00000370542 DFFBO76075 338 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
LMO4-201ENST00000370542 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
LMO4-201ENST00000370542 SERPINA2P20848 420 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 EWSR1Q01844 656 aaKnown RBP eCLIP12.31□□□□□ -0.44
LMO4-201ENST00000370542 TMEM182Q6ZP80 229 aaPredicted RBP12.31□□□□□ -0.44
LMO4-201ENST00000370542 C9orf139Q6ZV77 190 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
LMO4-201ENST00000370542 C3orf56Q8N813 242 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms