RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 TMEM37Q8WXS4 190 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 PLPPR2Q96GM1 343 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 SPIN2AQ99865 258 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 SPIN2BQ9BPZ2 258 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 CENPEQ02224 2701 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 HSPA12AO43301 675 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 DFFBO76075 338 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 RPLP1P05386 114 aaKnown RBP8.94□□□□□ -0.98
TPM3-212ENST00000368533 SRP19P09132 144 aaKnown RBP8.94□□□□□ -0.98
TPM3-212ENST00000368533 TMEM183AQ8IXX5 376 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 DEFB108BQ8NET1 73 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 OR8G5Q8NG78 346 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 OR5C1Q8NGR4 320 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 Q9N2K0 584 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 PITPNC1Q9UKF7 332 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 WSB1Q9Y6I7 421 aa8.94□□□□□ -0.98
TPM3-212ENST00000368533 SPG11Q96JI7 2443 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 SERPINE2P07093 398 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 CD40P25942 277 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 UQCRFS1P47985 274 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 FGF12P61328 243 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 SRPXP78539 464 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 IZUMO4Q1ZYL8 232 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 C1orf87Q8N0U7 546 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 TAAR3PQ9P1P4 343 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 KIR2DS1A0A191URI9 304 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 IQCF6A8MYZ5 107 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 THBDP07204 575 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 S100GP29377 79 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 KIR2DS4P43632 304 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 CD81P60033 236 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 CCL8P80075 99 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 KIR2DS1Q14954 304 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 RNF151Q2KHN1 245 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 LRTM2Q8N967 370 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 OR1P1Q8NH06 330 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 ACTR3CQ9C0K3 210 aaPredicted RBP8.93□□□□□ -0.98
TPM3-212ENST00000368533 ERRFI1Q9UJM3 462 aaPredicted RBP8.93□□□□□ -0.98
TPM3-212ENST00000368533 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
TPM3-212ENST00000368533 CSMD1Q96PZ7 3565 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 TRAV24A0A0B4J272 114 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 IGSF23A1L1A6 192 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 DPRXA6NFQ7 191 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 OR5B21A6NL26 309 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 J3QT63 122 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 DEGS1O15121 323 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 PLA2G5P39877 138 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 ERVFC1-1P60608 527 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 RAB11AP62491 216 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 LTC4SQ16873 150 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 AARDQ4LEZ3 155 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 Q6ZVH6 145 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 SELENOHQ8IZQ5 122 aaKnown RBP8.92□□□□□ -0.98
TPM3-212ENST00000368533 BOD1Q96IK1 185 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 GINS3Q9BRX5 216 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 CABLES2Q9BTV7 478 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 LPAR2Q9HBW0 351 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 KCNS2Q9ULS6 477 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 CHST1O43916 411 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 PLAUP00749 431 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 IGHV3-13P01766 116 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 IGHV3-7P01780 117 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 ATP6V0CP27449 155 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 GNB2P62879 340 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 RUNX1Q01196 453 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 ZNF266Q14584 549 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 SPSB3Q6PJ21 355 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 ZNF66Q6ZN08 573 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 MRGPRGQ86SM5 289 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 MOGAT3Q86VF5 341 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 OR4D5Q8NGN0 318 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 FAM122AQ96E09 287 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 OR2V2Q96R30 315 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 PLEKHF2Q9H8W4 249 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 ZNF835Q9Y2P0 537 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 CSMD2Q7Z408 3487 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 VPS13CQ709C8 3753 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 FAM208BQ5VWN6 2430 aa8.92□□□□□ -0.98
TPM3-212ENST00000368533 ZNF705FA8MVS1 300 aaPredicted RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 CDS2O95674 445 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 OR2H2O95918 312 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 ZNF705DP0CH99 300 aaPredicted RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 ZNF705BP0CI00 300 aaPredicted RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 DYNLT3P51808 116 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 KLF3P57682 345 aaPredicted RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 EDDM3AQ14507 147 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 ICAM4Q14773 271 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 DNLZQ5SXM8 178 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 TMEM171Q8WVE6 324 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 DNAJC4Q9NNZ3 241 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 PPP1R3CQ9UQK1 317 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 POLR3KQ9Y2Y1 108 aaPredicted RBP8.91□□□□□ -0.98
TPM3-212ENST00000368533 EGR1P18146 543 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 GABRA2P47869 451 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 HNF4GQ14541 408 aa8.91□□□□□ -0.98
TPM3-212ENST00000368533 LRRC29Q8WV35 223 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms