RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 POC1AQ8NBT0 407 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 Q8WTZ3 238 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 RNF2Q99496 336 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 RSRP1Q9BUV0 290 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 ELOVL5Q9NYP7 299 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 PXMP4Q9Y6I8 212 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 PLAUP00749 431 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 SERF2P84101 59 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 TNFRSF9Q07011 255 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 FOXF2Q12947 444 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 ZNF385CQ66K41 422 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 LYRM2Q9NU23 88 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 METTL1Q9UBP6 276 aaKnown RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 PHOX2AO14813 284 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 MMP7P09237 267 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 PAQR4Q8N4S7 273 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 OR10G8Q8NGN5 311 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 NRIP2Q9BQI9 281 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 FOXD3Q9UJU5 478 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 WASHC3Q9Y3C0 194 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 MPTX1A8MV57 137 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 MMP9P14780 707 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 SUMO1P63165 101 aaKnown RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 CYB561D1Q8N8Q1 229 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 OR13A1Q8NGR1 328 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 SLC25A28Q96A46 364 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 WDR61Q9GZS3 305 aaKnown RBP10.44□□□□□ -0.74
PTPRK-203ENST00000368207 TUBD1Q9UJT1 453 aa10.44□□□□□ -0.74
PTPRK-203ENST00000368207 SHANK1Q9Y566 2161 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 MSGN1A6NI15 193 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 IGHV3-48P01763 117 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 TFF1P04155 84 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 S100A8P05109 93 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 HIST1H3AP68431 136 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 ZNF788Q6ZQV5 615 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 OR2T10Q8NGZ9 312 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 TAF15Q92804 592 aaKnown RBP eCLIP10.43□□□□□ -0.748e-7■□□□□ 10.9
PTPRK-203ENST00000368207 PQLC2LA1A4F0 135 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 CEACAM18A8MTB9 384 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 B9A039 149 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 BTCP35070 178 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 RANP62826 216 aaKnown RBP10.43□□□□□ -0.74
PTPRK-203ENST00000368207 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 NAGKQ9UJ70 344 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 ZNF729A6NN14 1252 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-203ENST00000368207 FHITP49789 147 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 MIC13Q5XKP0 118 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 OR10D4PQ8NGN7 298 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 RSPO3Q9BXY4 272 aaPredicted RBP10.43□□□□□ -0.74
PTPRK-203ENST00000368207 TLNRD1Q9H1K6 362 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 FAM208BQ5VWN6 2430 aa10.43□□□□□ -0.74
PTPRK-203ENST00000368207 CXorf1O96002 111 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 APOBEC3AP31941 199 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 HSPE1P61604 102 aaKnown RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 SPACA3Q8IXA5 215 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 H1FOOQ8IZA3 346 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 GRAMD2BQ96HH9 432 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 TMEM106BQ9NUM4 274 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 TCF19Q9Y242 345 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 C5orf63A6NC05 138 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 DPF1Q92782 380 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 NABP1Q96AH0 204 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 PERPQ96FX8 193 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 RTBDNQ9BSG5 229 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 HTR1DP28221 377 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 PLAURQ03405 335 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 MMD2Q8IY49 270 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 OR9G1Q8NH87 305 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 LILRB1Q8NHL6 650 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 HELTA6NFD8 242 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 J3KRW8 73 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 IFNL4K9M1U5 179 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 DNASE2O00115 360 aaPredicted RBP10.42□□□□□ -0.74
PTPRK-203ENST00000368207 LINC00869P0C866 280 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 BCL2P10415 239 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 CCL1P22362 96 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 GFRA1P56159 465 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 KHDC3LQ587J8 217 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 PNKDQ8N490 385 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 TOLLIPQ9H0E2 274 aa10.42□□□□□ -0.74
PTPRK-203ENST00000368207 REG1AP05451 166 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 CRYGSP22914 178 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 POM121Q96HA1 1249 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 HELZP42694 1942 aaKnown RBP10.41□□□□□ -0.74
PTPRK-203ENST00000368207 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 IQCF6A8MYZ5 107 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 RND2P52198 227 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 PLPPR1Q8TBJ4 325 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 ATP5J2P56134 94 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 RPEL1Q2QD12 228 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 IL22RA2Q969J5 263 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 STARD4Q96DR4 205 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 SRD5A3Q9H8P0 318 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 PLXNA4Q9HCM2 1894 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 IGKV3D-15A0A087WSY6 115 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 LOC102723971A0A1B0GUV8 181 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 DLL1O00548 723 aa10.41□□□□□ -0.74
PTPRK-203ENST00000368207 SRSF10O75494 262 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms