RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 M0R2Z0 102 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 RPL31P62899 125 aaKnown RBP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 MEF2BQ02080 365 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 LRRC75BQ2VPJ9 315 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 UNQ5815/PRO19632Q6UWF5 114 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 TAF15Q92804 592 aaKnown RBP eCLIP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 WNT5BQ9H1J7 359 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 FUT9Q9Y231 359 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 OTOFQ9HC10 1997 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SPTBN2O15020 2390 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 RP1P56715 2156 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 K7N7A8 449 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 LYPD3O95274 346 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 TBX6O95947 436 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 PPP1R17O96001 155 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SCTP09683 121 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 FAM157CP0CG43 387 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 EFNB1P98172 346 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SNAI3Q3KNW1 292 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 GPR146Q96CH1 333 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 GALNT14Q96FL9 552 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 RTN4RQ9BZR6 473 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 RBKSQ9H477 322 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SRD5A3Q9H8P0 318 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 DLL3Q9NYJ7 618 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SLC25A10Q9UBX3 287 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 JPT1Q9UK76 154 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF256Q9Y2P7 627 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 TMSB15BA0A087X1C1 80 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 A0A1W2PP11 408 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 REG1BP48304 166 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SNRNP40Q96DI7 357 aaKnown RBP7.74□□□□□ -1.17
SYNE1-205ENST00000367251 MIOXQ9UGB7 285 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 CDC42EP3Q9UKI2 254 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 ZDHHC8Q9ULC8 765 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 TGFAP01135 160 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 APCSP02743 223 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 FAM209BQ5JX69 171 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 CALHM1Q8IU99 346 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 WDFY1Q8IWB7 410 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF383Q8NA42 475 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 OR4X1Q8NH49 305 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 SPSB2Q99619 263 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 HSPB8Q9UJY1 196 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 A8MXK9 166 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 H3BVH4 76 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 PTGDSP41222 190 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 LDLRAD3Q86YD5 345 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 OR13C6PQ8NH95 151 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 MAP1LC3CQ9BXW4 147 aa7.74□□□□□ -1.17
SYNE1-205ENST00000367251 HOXA3O43365 443 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-205ENST00000367251 STPG3Q8N7X2 389 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 OR4C5Q8NGB2 326 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 PXMP4Q9Y6I8 212 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 PQLC2LA1A4F0 135 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 HERPUD1Q15011 391 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 TMEM78Q5T7P6 136 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 ASPHD2Q6ICH7 369 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 REC114Q7Z4M0 266 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 SPRED2Q7Z698 418 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 SSMEM1Q8WWF3 244 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 VGLL1Q99990 258 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 PRO1933Q9H354 126 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 NAT1P18440 290 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 COL8A1P27658 744 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 NKX2-8O15522 239 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 NDUFA2O43678 99 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 MEIG1Q5JSS6 88 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF502Q8TBZ5 544 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 SRXN1Q9BYN0 137 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 ANK1P16157 1881 aa7.73□□□□□ -1.17
SYNE1-205ENST00000367251 IGHV3OR15-7A0A075B7D8 119 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 IGLV3-32A0A0A0MS00 114 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 hCG_38984A0A1B0GV85 526 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 CGB1A6NKQ9 187 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 KLF7O75840 302 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 PRSS2P07478 247 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF708P17019 499 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 MPV17P39210 176 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 UNC119Q13432 240 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF506Q5JVG8 444 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 PQLC2Q6ZP29 291 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 FGFRL1Q8N441 504 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 OR5P3Q8WZ94 311 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 RNF115Q9Y4L5 304 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 TRBV9A0A0B4J1U6 114 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 RECKO95980 971 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 APCDD1LQ8NCL9 501 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 ZNF714Q96N38 554 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 DIDO1Q9BTC0 2240 aaKnown RBP7.72□□□□□ -1.17
SYNE1-205ENST00000367251 OR4A5Q8NH83 315 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 MYOZ3Q8TDC0 251 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 PAXXQ9BUH6 204 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 TLNRD1Q9H1K6 362 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 METRNQ9UJH8 293 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 A0A1B0GTI1 187 aa7.72□□□□□ -1.17
SYNE1-205ENST00000367251 IGKV3-20P01619 116 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms