RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MS4A5Q9H3V2 200 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 CALYQ9NYX4 217 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 PQLC2LA1A4F0 135 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 LHX2P50458 406 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 VKORC1L1Q8N0U8 176 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 OR4X1Q8NH49 305 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 FAM3BP58499 235 aaPredicted RBP13.89□□□□□ -0.19
SCAF1-201ENST00000360565 FAM162BQ5T6X4 162 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 ZNF343Q6P1L6 599 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 CA5BP1Q8WTZ4 195 aa13.89□□□□□ -0.19
SCAF1-201ENST00000360565 RCC1LQ96I51 464 aaKnown RBP13.89□□□□□ -0.19
SCAF1-201ENST00000360565 PINLYPA6NC86 204 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 LRRC3CA6NJW4 275 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 K7N7A8 449 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 CLDN18P56856 261 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PSG7Q13046 419 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 RNASEKQ6P5S7 137 aaKnown RBP13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PDPNQ86YL7 162 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 FAM216AQ8WUB2 273 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 NDFIP1Q9BT67 221 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PPIAL4EA0A075B759 164 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 C9orf172C9J069 976 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PPIAL4DF5H284 164 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 MPDU1O75352 247 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PPIAL4FP0DN26 164 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 IER3P46695 156 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 OR4F17Q8NGA8 305 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PCGF1Q9BSM1 259 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PPIAL4AQ9Y536 164 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 INSIG2Q9Y5U4 225 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 PLXNA2O75051 1894 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 C1orf185Q5T7R7 199 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 VWA1Q6PCB0 445 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 ABHD12Q8N2K0 398 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 ZNRF1Q8ND25 227 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 TMEM140Q9NV12 185 aa13.88□□□□□ -0.19
SCAF1-201ENST00000360565 J3QW42 95 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 CELA3BP08861 270 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 OR10J1P30954 320 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 GPR61Q9BZJ8 451 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 NTN3O00634 580 aaPredicted RBP13.87□□□□□ -0.19
SCAF1-201ENST00000360565 FGF16O43320 207 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 SMPD2O60906 423 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 ZNF883P0CG24 379 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 Q56UQ5 140 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 WDR73Q6P4I2 378 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 KLHDC1Q8N7A1 406 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 P2RX4Q99571 388 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 AAMDCQ9H7C9 122 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 SRD5A3Q9H8P0 318 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 PNRC2Q9NPJ4 139 aaKnown RBP13.87□□□□□ -0.19
SCAF1-201ENST00000360565 SEMA5BQ9P283 1151 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 DOPEY2Q9Y3R5 2298 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 DOCK10Q96BY6 2186 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 SNURFLB1AK76 121 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 WNT5AP41221 380 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 RNF2Q99496 336 aa13.87□□□□□ -0.19
SCAF1-201ENST00000360565 GAMTQ14353 236 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 WDR61Q9GZS3 305 aaKnown RBP13.86□□□□□ -0.19
SCAF1-201ENST00000360565 CACNA1BQ00975 2339 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 FRMPD3Q5JV73 1810 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 IGHV3-21A0A0B4J1V1 117 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 CECR9P0C854 216 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 MRPS18CQ9Y3D5 142 aaKnown RBP13.86□□□□□ -0.19
SCAF1-201ENST00000360565 CISD1Q9NZ45 108 aaKnown RBP13.86□□□□□ -0.19
SCAF1-201ENST00000360565 TCF19Q9Y242 345 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 IGKV1-27A0A075B6S5 117 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 NEURL1O76050 574 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 EGR1P18146 543 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 RANP62826 216 aaKnown RBP13.86□□□□□ -0.19
SCAF1-201ENST00000360565 QRFPP83859 136 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 SLC35E4Q6ICL7 350 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 GCSAMQ8N6F7 178 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 RAB1CQ92928 201 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 GP6Q9HCN6 339 aa13.86□□□□□ -0.19
SCAF1-201ENST00000360565 IGHV3-72A0A0B4J1Y9 119 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 GGNQ86UU5 652 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 TMEM56-RWDD3S4R434 201 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 LOC102723971A0A1B0GUV8 181 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 CCKARP32238 428 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 SLC35B1P78383 322 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 ARL16Q0P5N6 197 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 PSMG3Q9BT73 122 aaPredicted RBP13.85□□□□□ -0.19
SCAF1-201ENST00000360565 DCTN5Q9BTE1 182 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 ZMAT5Q9UDW3 170 aaKnown RBP13.85□□□□□ -0.19
SCAF1-201ENST00000360565 IL19Q9UHD0 177 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 HSPE1P61604 102 aaKnown RBP13.85□□□□□ -0.19
SCAF1-201ENST00000360565 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 C10orf113Q5VZT2 155 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 OR1L6Q8NGR2 347 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 PARLQ9H300 379 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 DENND4CQ5VZ89 1909 aa13.85□□□□□ -0.19
SCAF1-201ENST00000360565 TRAV34A0A0B4J273 112 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 FOSL1P15407 271 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 ZDHHC16Q969W1 377 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 C17orf98A8MV24 154 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 TNFSF10P50591 281 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 HLA-DRB5Q30154 266 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 PLPPR1Q8TBJ4 325 aa13.84□□□□□ -0.19
SCAF1-201ENST00000360565 C18orf12Q96KH6 178 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms