RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CCL28Q9NRJ3 127 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 KCNIP1Q9NZI2 227 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 RNF115Q9Y4L5 304 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 FAM24AA6NFZ4 105 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 SEC14L6B5MCN3 397 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 SEC11BP0C7V7 166 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 HEPN1Q6WQI6 88 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 LRRC29Q8WV35 223 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 GINS3Q9BRX5 216 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 ARV1Q9H2C2 271 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 UBE2J1Q9Y385 318 aaPredicted RBP11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 MMP24Q9Y5R2 645 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 SRRM5B3KS81 715 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 E7EQL1 145 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 CLDN1O95832 211 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 PAX5Q02548 391 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 ADIPOQQ15848 244 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 DMRTA1Q5VZB9 504 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 OR10V1Q8NGI7 309 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 R3HDM4Q96D70 268 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 MAGT1Q9H0U3 335 aa11.56□□□□□ -0.56
CSNK1E-201ENST00000359867 ZNF727A8MUV8 499 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 CEBPDP49716 269 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 SAPCD1Q5SSQ6 148 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 SLC35G3Q8N808 338 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 IL1F10Q8WWZ1 152 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 IL22RA2Q969J5 263 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 GCN1Q92616 2671 aaKnown RBP11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 A0A1W2PPR1 153 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 OOEPA6NGQ2 149 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 H0Y980 276 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HSD17B6O14756 317 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BKO60814 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 PGLYRP1O75594 196 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BJP06899 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 OR4A8P0C604 315 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BOP23527 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 UCP1P25874 307 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BBP33778 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 GATA4P43694 442 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BDP58876 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BCP62807 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST2H2BEQ16778 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BHQ93079 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BNQ99877 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 HIST1H2BMQ99879 126 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 SLC35B3Q9H1N7 401 aa11.55□□□□□ -0.56
CSNK1E-201ENST00000359867 DOPEY2Q9Y3R5 2298 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 ST8SIA3O43173 380 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 CDS2O95674 445 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 EWSR1Q01844 656 aaKnown RBP eCLIP11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 ZNF695Q8IW36 515 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 FAM222BQ8WU58 562 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 YPEL4Q96NS1 127 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 CISD1Q9NZ45 108 aaKnown RBP11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 OR1A1Q9P1Q5 309 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 HSPA12AO43301 675 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 TMEM11P17152 192 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 OR3A1P47881 315 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 COL10A1Q03692 680 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 TESK1Q15569 626 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 HAGHQ16775 308 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 ETFRF1Q6IPR1 90 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 THNSL2Q86YJ6 484 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 OR5D13Q8NGL4 314 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 SPIN2AQ99865 258 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 SPIN2BQ9BPZ2 258 aa11.54□□□□□ -0.56
CSNK1E-201ENST00000359867 AKAP6Q13023 2319 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 TRAV39A0A0B4J263 110 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 CLEC18AA5D8T8 446 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 PPP1R2P9O14990 202 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 OR2C1O95371 312 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 F2RP25116 425 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 PRDX2P32119 198 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 DNLZQ5SXM8 178 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 ZNF343Q6P1L6 599 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 SELENOHQ8IZQ5 122 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 CLEC18CQ8NCF0 446 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 BEND2Q8NDZ0 799 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 OR2G3Q8NGZ4 309 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 GALMQ96C23 342 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 IGSF23A1L1A6 192 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 LHBP01229 141 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 ZNF674Q2M3X9 581 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 TRAT1Q6PIZ9 186 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 CD177Q8N6Q3 437 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 SVIPQ8NHG7 77 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 PPP1R35Q8TAP8 253 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 COQ2Q96H96 371 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 TMEM204Q9BSN7 226 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 URGCP-MRPS24S4R325 110 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
CSNK1E-201ENST00000359867 CENPEQ02224 2701 aa11.52□□□□□ -0.56
CSNK1E-201ENST00000359867 SSSCA1O60232 199 aa11.52□□□□□ -0.57
CSNK1E-201ENST00000359867 PSG2P11465 335 aa11.52□□□□□ -0.57
CSNK1E-201ENST00000359867 ATP6V0CP27449 155 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms