RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 PPT1P50897 306 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 SLC38A11Q08AI6 406 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 LRRC75BQ2VPJ9 315 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 AARDQ4LEZ3 155 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 DHRS7BQ6IAN0 325 aaPredicted RBP12.32□□□□□ -0.44
GABPB1-202ENST00000359031 THNSL2Q86YJ6 484 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
GABPB1-202ENST00000359031 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 RFNGQ9Y644 331 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 ZGRF1Q86YA3 2104 aa12.32□□□□□ -0.44
GABPB1-202ENST00000359031 PROP1O75360 226 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 NPBWR1P48145 328 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 CASP6P55212 293 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 ADAM5Q6NVV9 412 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 SPSB3Q6PJ21 355 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
GABPB1-202ENST00000359031 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 FAM216BQ8N7L0 139 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 CLRN3Q8NCR9 226 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 DTD1Q8TEA8 209 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 CCL13Q99616 98 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 IDI2-AS1Q9NZ38 188 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 DOPEY2Q9Y3R5 2298 aa12.31□□□□□ -0.44
GABPB1-202ENST00000359031 TRAV38-1A0A0B4J264 116 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 FCGR3BO75015 233 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
GABPB1-202ENST00000359031 ATF4P18848 351 aaPredicted RBP12.3□□□□□ -0.44
GABPB1-202ENST00000359031 ERVK-16P61578 105 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 CCL8P80075 99 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 SERF2P84101 59 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 SP5Q6BEB4 398 aaPredicted RBP12.3□□□□□ -0.44
GABPB1-202ENST00000359031 DEFB108BQ8NET1 73 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 RBMXL1Q96E39 390 aaKnown RBP12.3□□□□□ -0.44
GABPB1-202ENST00000359031 OR4C12Q96R67 309 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 S1PR3Q99500 378 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
GABPB1-202ENST00000359031 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 FBXO7Q9Y3I1 522 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 TIMM9Q9Y5J7 89 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 CADP27708 2225 aa12.3□□□□□ -0.44
GABPB1-202ENST00000359031 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 hADV38S2A0JD32 116 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 SLC31A2O15432 143 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 ZNF134P52741 427 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 RPL39P5Q59GN2 51 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 NCMAPQ5T1S8 102 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 ZNF439Q8NDP4 499 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 OR4S2Q8NH73 311 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 DDB2Q92466 427 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
GABPB1-202ENST00000359031 PLPPR2Q96GM1 343 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 ADTRPQ96IZ2 230 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 WFIKKN1Q96NZ8 548 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 TMEM147Q9BVK8 224 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 SLC35B3Q9H1N7 401 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 TRGV8A0A0C4DH27 118 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 UBE2L5PA0A1B0GUS4 154 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 CEBPZOSA8MTT3 80 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 GPR37O15354 613 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 ZG16O60844 167 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 RBMXL2O75526 392 aaKnown RBP12.29□□□□□ -0.44
GABPB1-202ENST00000359031 NQO2P16083 231 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 THBS3P49746 956 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 LINC00205P59089 165 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 CT45A1Q5HYN5 189 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 PRAMEF5Q5TYX0 476 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 CT45A3Q8NHU0 189 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 RSG1Q9BU20 258 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 DCAF16Q9NXF7 216 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 LINC00312Q9Y6C7 94 aa12.29□□□□□ -0.44
GABPB1-202ENST00000359031 SAA2-SAA4A0A096LPE2 208 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 A0A1B0GV50 99 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 RBFOX3A6NFN3 312 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 PMS2P5A8MQ11 134 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 SHISA9B4DS77 424 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 OR9G9P0C7N8 305 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 SAA2P0DJI9 122 aaPredicted RBP12.28□□□□□ -0.44
GABPB1-202ENST00000359031 CA7P43166 264 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
GABPB1-202ENST00000359031 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
GABPB1-202ENST00000359031 OR8G2PQ6IF36 304 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 TAF15Q92804 592 aaKnown RBP eCLIP12.28□□□□□ -0.44
GABPB1-202ENST00000359031 QTRT1Q9BXR0 403 aaKnown RBP12.28□□□□□ -0.44
GABPB1-202ENST00000359031 GAL3ST2Q9H3Q3 398 aa12.28□□□□□ -0.44
GABPB1-202ENST00000359031 PRRC2CQ9Y520 2896 aaKnown RBP12.27□□□□□ -0.44
GABPB1-202ENST00000359031 PPIAL4EA0A075B759 164 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 PPIAL4DF5H284 164 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 TMEM178BH3BS89 294 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 PPIAL4FP0DN26 164 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 SPCS3P61009 180 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 VWC2Q2TAL6 325 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 FBXL19-AS1Q494R0 122 aa12.27□□□□□ -0.44
GABPB1-202ENST00000359031 TMEM41BQ5BJD5 291 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms