RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 GDF9O60383 454 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 SRP14P37108 136 aaKnown RBP11.72□□□□□ -0.53
VCP-201ENST00000358901 RIGQ13278 110 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 LSM10Q969L4 123 aaKnown RBP11.72□□□□□ -0.53
VCP-201ENST00000358901 WFIKKN1Q96NZ8 548 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 CISD1Q9NZ45 108 aaKnown RBP11.72□□□□□ -0.53
VCP-201ENST00000358901 H0YIZ8 118 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
VCP-201ENST00000358901 PQLC2Q6ZP29 291 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 VKORC1L1Q8N0U8 176 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 Q8WTZ3 238 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 ZNF646O15015 1829 aaPredicted RBP11.72□□□□□ -0.53
VCP-201ENST00000358901 MED13LQ71F56 2210 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 GOSR1O95249 250 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 HCP5Q6MZN7 132 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 SLC25A28Q96A46 364 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 SMIM8Q96KF7 97 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 MESP1Q9BRJ9 268 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 MAP1LC3CQ9BXW4 147 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 MRPL13Q9BYD1 178 aaKnown RBP11.72□□□□□ -0.53
VCP-201ENST00000358901 COA4Q9NYJ1 87 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 CALYQ9NYX4 217 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 HYPMO75409 117 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 SSTR5P35346 364 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.53
VCP-201ENST00000358901 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
VCP-201ENST00000358901 TMEM265A0A087WTH1 108 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 IGKV1-9A0A0C4DH69 117 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 PRR33A8MZF0 331 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 PROB1E7EW31 1015 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 MST1P26927 711 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 RTP5Q14D33 572 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 ATP1A1-AS1Q5TC04 95 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 TCF19Q9Y242 345 aa11.71□□□□□ -0.53
VCP-201ENST00000358901 SYNGR3O43761 229 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 KBTBD11O94819 623 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 EFEMP2O95967 443 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 CELA3AP09093 270 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 UCP1P25874 307 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 DDTP30046 118 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 RPL27AP46776 148 aaKnown RBP11.71□□□□□ -0.54
VCP-201ENST00000358901 PAFAH1B2P68402 229 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 ZNF319Q9P2F9 582 aa11.71□□□□□ -0.54
VCP-201ENST00000358901 DOCK10Q96BY6 2186 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 MT-ND6P03923 174 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 KIAA1644Q3SXP7 199 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 BIVMQ86UB2 503 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 PAQR4Q8N4S7 273 aaPredicted RBP11.7□□□□□ -0.54
VCP-201ENST00000358901 EIF4E3Q8N5X7 224 aaKnown RBP11.7□□□□□ -0.54
VCP-201ENST00000358901 OR8B3Q8NGG8 313 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 OR8B2Q96RD0 313 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 IGKV3-7A0A075B6H7 116 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 RHBDL1O75783 438 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 LGALS7P47929 136 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 RPL8P62917 257 aaKnown RBP11.7□□□□□ -0.54
VCP-201ENST00000358901 ZNF714Q96N38 554 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 A8MWL6 223 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 CORTO00230 105 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 WNT9BO14905 357 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
VCP-201ENST00000358901 LTBRP36941 435 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 C1orf174Q8IYL3 243 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 DDA1Q9BW61 102 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 METTL1Q9UBP6 276 aaKnown RBP11.7□□□□□ -0.54
VCP-201ENST00000358901 ZNF735P0CB33 412 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 PTGDSP41222 190 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 FXYD3Q14802 87 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 Q1RN00 199 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 OR5P3Q8WZ94 311 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 ZDHHC16Q969W1 377 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 HEXA-AS1Q9H8Q6 139 aa11.7□□□□□ -0.54
VCP-201ENST00000358901 GCGP01275 180 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 NAT2P11245 290 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 CRYBB3P26998 211 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 PPOXP50336 477 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 ZNF506Q5JVG8 444 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 GCSAMQ8N6F7 178 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 GGACTQ9BVM4 153 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 DOCK8Q8NF50 2099 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
VCP-201ENST00000358901 AHRRA9YTQ3 701 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 J3KRW8 73 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 CD99P14209 185 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 RND2P52198 227 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 PRNTQ86SH4 94 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 PSMG3Q9BT73 122 aaPredicted RBP11.69□□□□□ -0.54
VCP-201ENST00000358901 TMEM250H0YL14 139 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 CD82P27701 267 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 SELENOTP62341 195 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 TMEM116Q8NCL8 245 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
VCP-201ENST00000358901 C1RLQ9NZP8 487 aa11.69□□□□□ -0.54
VCP-201ENST00000358901 PGPA6NDG6 321 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 IGHV3-48P01763 117 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 SCGB1C2P0DMR2 95 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 ASCL5Q7RTU5 278 aa11.68□□□□□ -0.54
VCP-201ENST00000358901 TIMP4Q99727 224 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms