RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 TCF23Q7RTU1 214 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 PRSS41Q7RTY9 318 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 PPP1R32Q7Z5V6 425 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 GGNQ86UU5 652 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 UEVLDQ8IX04 471 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 ODF3L1Q8IXM7 274 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 KLHDC1Q8N7A1 406 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 LRTM2Q8N967 370 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 OR4S2Q8NH73 311 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 PLPPR1Q8TBJ4 325 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 CPT1CQ8TCG5 803 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 RTN4IP1Q8WWV3 396 aaPredicted RBP3.39□□□□□ -1.87
CNGA1-201ENST00000358519 ADAT3Q96EY9 351 aaPredicted RBP3.39□□□□□ -1.87
CNGA1-201ENST00000358519 RBM24Q9BX46 236 aaKnown RBP3.39□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM59Q9BXS4 323 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 WNT10AQ9GZT5 417 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 C11orf1Q9H5F2 150 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 VSIRQ9H7M9 311 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 ELOVL5Q9NYP7 299 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 CDC42EP3Q9UKI2 254 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 VDAC3Q9Y277 283 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 R4GMQ9 66 aa3.39□□□□□ -1.87
CNGA1-201ENST00000358519 PHF3Q92576 2039 aaKnown RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 TDRD6O60522 2096 aaKnown RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 IGHV2-26A0A0B4J1V2 119 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 DUXBA0A1W2PPF3 345 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A10PA6NDY2 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A18PA6NE21 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A16PA6NEW6 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A20PA6NIJ5 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A8PA6NJQ4 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A7PA6NKC0 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM166BA8MTA8 275 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A22PA8MWA6 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A12PA8MX19 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A5PA8MXJ8 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A23PA8MXZ1 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 NPIPA5E9PKD4 350 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SSSCA1O60232 199 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF737O75373 536 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SNRNP200O75643 2136 aaKnown RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 IGHG3P01860 377 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 GPX1P07203 203 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FREM3P0C091 2139 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A15PP0C7V4 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A13PP0C7W8 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A14PP0C7W9 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM90A24PP0C7X0 464 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 CRISP2P16562 243 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 GUCA1AP43080 201 aaPredicted RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 CYB561P49447 251 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 CLDN17P56750 224 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 PPP1CAP62136 330 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 RBPJQ06330 500 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 MZT1Q08AG7 82 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF154Q13106 437 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SRSF7Q16629 238 aaKnown RBP eCLIP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ABCA11PQ4W5N1 156 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 LRRC10Q5BKY1 277 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF542PQ5EBM4 170 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SAMD13Q5VXD3 122 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 BAGE3Q86Y29 109 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 BAGE2Q86Y30 109 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 WFDC3Q8IUB2 231 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SHISA5Q8N114 240 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 PNKDQ8N490 385 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 FAM89BQ8N5H3 189 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 TCTEX1D1Q8N7M0 179 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SIGLECL1Q8N7X8 197 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 OR5D14Q8NGL3 314 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 CT55Q8WUE5 264 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 MBD3L1Q8WWY6 194 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM186Q96B77 213 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SARAFQ96BY9 339 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 MSI2Q96DH6 328 aaKnown RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 C1orf147Q96MC9 270 aaPredicted RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 UHRF2Q96PU4 802 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 LIME1Q9H400 295 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 C12orf49Q9H741 205 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 NAA60Q9H7X0 242 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ZDHHC11Q9H8X9 412 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 DECR2Q9NUI1 292 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 MBNL3Q9NUK0 354 aaKnown RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF586Q9NXT0 402 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 NPIPA1Q9UND3 350 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 PTRH2Q9Y3E5 179 aaKnown RBP3.38□□□□□ -1.87
CNGA1-201ENST00000358519 ITPR3Q14573 2671 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 PCNX3Q9H6A9 2034 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 NKX2-6A6NCS4 301 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 OR2T8A6NH00 312 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SERPINE3A8MV23 424 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 F2Z2F3 143 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 G3V3Y1 287 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 G3V4G9 280 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 HS3ST1O14792 307 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 TAX1BP3O14907 124 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 GNG7O60262 68 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 OR7C2O60412 319 aa3.38□□□□□ -1.87
CNGA1-201ENST00000358519 SLC16A7O60669 478 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms