RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ZAR1Q86SH2 424 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 DOLPP1Q86YN1 238 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 KLF13Q9Y2Y9 288 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 USF1P22415 310 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SNAI3Q3KNW1 292 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 EMC6Q9BV81 110 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 IFITM10A6NMD0 228 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PAPPA-AS1Q5QFB9 102 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 GFI1Q99684 422 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SAA2-SAA4A0A096LPE2 208 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 APOBEC3AP31941 199 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 FOLR3P41439 243 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 OR9G4Q8NGQ1 327 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 IGKV3D-11A0A0A0MRZ8 115 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ACP1P24666 158 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 PTGER1P34995 402 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 TIMM23BQ5SRD1 257 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 FAM71F2Q6NXP2 309 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SPSB3Q6PJ21 355 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 R3HDMLQ9H3Y0 253 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 CD5LO43866 347 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 FAM169BQ8N8A8 192 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 TANC2Q9HCD6 1990 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 DENND4CQ5VZ89 1909 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 HIST1H1AQ02539 215 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 FOXF1Q12946 379 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 OR4P4Q8NGL7 312 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 UBALD1Q8TB05 177 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 MISP3Q96FF7 219 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SRSF8Q9BRL6 282 aaKnown RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 WNT5BQ9H1J7 359 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 IGLV3-12A0A075B6K2 115 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 WIPF2Q8TF74 440 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 MS4A18H0YCH9 400 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 NTF3P20783 257 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 MC5RP33032 325 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 MS4A18Q3C1V0 323 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SFTPA2Q8IWL1 248 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SFTPA1Q8IWL2 248 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 OR6C1Q96RD1 312 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ACACAQ13085 2346 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 YLPM1P49750 1951 aaKnown RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 DLL1O00548 723 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 RHBDL1O75783 438 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 CER1O95813 267 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 NAPSAO96009 420 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SSBP4Q9BWG4 385 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A22Q9H936 323 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 LEPROTL1O95214 131 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 DUSP2Q05923 314 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF880Q6PDB4 577 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 C17orf78Q8N4C9 275 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 GCSAMQ8N6F7 178 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 MMP17Q9ULZ9 603 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 KLF7O75840 302 aaPredicted RBP3.53□□□□□ -1.84
SYNE2-204ENST00000358025 P01737 135 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 COL10A1Q03692 680 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 EGR4Q05215 589 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 TEX43Q6ZNM6 134 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ASCL5Q7RTU5 278 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 SLC25A40Q8TBP6 338 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 NLRC5Q86WI3 1866 aa3.53□□□□□ -1.84
SYNE2-204ENST00000358025 ZNF205O95201 554 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 MPZL1O95297 269 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 SMAGPQ0VAQ4 97 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 GPR82Q96P67 336 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 SPACA5Q96QH8 159 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 NAV3Q8IVL0 2385 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 FAM221AA4D161 298 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 A6NCN8 305 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 OR2T8A6NH00 312 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 SPATA31B1PQ5VZV4 182 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 MRPL14Q6P1L8 145 aaKnown RBP3.53□□□□□ -1.85
SYNE2-204ENST00000358025 MMD2Q8IY49 270 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 GAPTQ8N292 157 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 C5orf30Q96GV9 206 aa3.53□□□□□ -1.85
SYNE2-204ENST00000358025 GCHFRP30047 84 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM230Q96A57 120 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 MRPL18Q9H0U6 180 aaKnown RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 BMPR1BO00238 502 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 ADCYAP1P18509 176 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 PPP1CAP62136 330 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 CT83Q5H943 113 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SLC25A48Q6ZT89 311 aaKnown RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 RNF115Q9Y4L5 304 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 AMMECR1Q9Y4X0 333 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 ERVK11-1P61568 191 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 IGFBP6P24592 240 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 TDGF1P3P51864 188 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SNURFLB1AK76 121 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 HYAL1Q12794 435 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 C1orf162Q8NEQ5 155 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 SEMA5BQ9P283 1151 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 ARHGAP21Q5T5U3 1957 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 IGHV2OR16-5A0A0B4J2B6 119 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 F2Z2F3 143 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 IL11P20809 199 aa3.52□□□□□ -1.85
SYNE2-204ENST00000358025 NRG2O14511 850 aaPredicted RBP3.52□□□□□ -1.85
SYNE2-204ENST00000358025 TIAF1O95411 115 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms