RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 RUSC1-AS1Q66K80 236 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 KLHDC1Q8N7A1 406 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 UQCC2Q9BRT2 126 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 FBXL7Q9UJT9 491 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 CECR9P0C854 216 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 IGFBP2P18065 325 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 FUT5Q11128 374 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 LDLRAD2Q5SZI1 272 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 DNASE2BQ8WZ79 361 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 RHOVQ96L33 236 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 WDFY2Q96P53 400 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 NUP205Q92621 2012 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 OR4C45A6NMZ5 311 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 APOMO95445 188 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 ZP1P60852 638 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 PRSS42Q7Z5A4 293 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 ZNF418Q8TF45 676 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-202ENST00000357409 EIF4E3Q8N5X7 224 aaKnown RBP6.24□□□□□ -1.41
VPS13A-202ENST00000357409 ZNF383Q8NA42 475 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 MIOXQ9UGB7 285 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 MGST3O14880 152 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 MLNRO43193 412 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 CA2P00918 260 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 FHITP49789 147 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 ZNF273Q14593 569 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 UNQ6494/PRO21346Q6UXR6 183 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 PHIPQ8WWQ0 1821 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 MYH15Q9Y2K3 1946 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 RPL8P62917 257 aaKnown RBP6.24□□□□□ -1.41
VPS13A-202ENST00000357409 MBNL3Q9NUK0 354 aaKnown RBP6.24□□□□□ -1.41
VPS13A-202ENST00000357409 SPRR3Q9UBC9 169 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 VAX2Q9UIW0 290 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 TRBV20OR9-2A0A075B6H5 130 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 PSCAO43653 123 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 PSG7Q13046 419 aa6.24□□□□□ -1.41
VPS13A-202ENST00000357409 A0A087WV48 116 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 H3BQ15 152 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 OGG1O15527 345 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 DXOO77932 396 aaKnown RBP6.23□□□□□ -1.41
VPS13A-202ENST00000357409 PTBP1P26599 531 aaKnown RBP eCLIP6.23□□□□□ -1.413e-7■■■■■ 27.3
VPS13A-202ENST00000357409 KIR2DS2P43631 304 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 NRGNQ92686 78 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 ODAMA1E959 279 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 FOXH1O75593 365 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 PPP1R27Q86WC6 154 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 OR2T10Q8NGZ9 312 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 PLPPR1Q8TBJ4 325 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 EEF1AKMT3Q96AZ1 226 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 TP53RKQ96S44 253 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 SLC25A39Q9BZJ4 359 aaPredicted RBP6.23□□□□□ -1.41
VPS13A-202ENST00000357409 DMRT1Q9Y5R6 373 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 VENTXO95231 258 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CGAP01215 116 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 Q0VFX4 171 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 ZNF818PQ6ZRF7 136 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CALHM1Q8IU99 346 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 OR5AN1Q8NGI8 311 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 MMP26Q9NRE1 261 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 LPAR3Q9UBY5 353 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 SYNGR3O43761 229 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 TRGC2P03986 189 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 HERVK_113P61574 105 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 LCNL1Q6ZST4 164 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 A0A1W2PQD3 144 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CEACAM4O75871 244 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 TYMSP04818 313 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CFHR1Q03591 330 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 OR4X2Q8NGF9 303 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CHST5Q9GZS9 411 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 OR51M1Q9H341 326 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 FER1L6Q2WGJ9 1857 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 SLC35B3Q9H1N7 401 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 GEMIN7Q9H840 131 aaKnown RBP6.23□□□□□ -1.41
VPS13A-202ENST00000357409 ZNF107Q9UII5 783 aaPredicted RBP6.23□□□□□ -1.41
VPS13A-202ENST00000357409 IGSF23A1L1A6 192 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CD7P09564 240 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CEACAM1P13688 526 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 GNG5P63218 68 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 MLANAQ16655 118 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 CCDC144NLQ6NUI1 221 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 PRNDQ9UKY0 176 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 LHFPL6Q9Y693 200 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 SCN11AQ9UI33 1791 aa6.23□□□□□ -1.41
VPS13A-202ENST00000357409 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 ALX3O95076 343 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 SOD3P08294 240 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 ARL14EPLP0DKL9 152 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 ERVK11-1P61568 191 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 TBR1Q16650 682 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 DEGS2Q6QHC5 323 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 HPRT1P00492 218 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 TMEM252Q8N6L7 170 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 ZNF525Q8N782 197 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 OR10W1Q8NGF6 305 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 Q96MF0 132 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 VGLL1Q99990 258 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 ADTRPQ96IZ2 230 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 A0A1W2PR77 199 aa6.22□□□□□ -1.41
VPS13A-202ENST00000357409 TMEM210A6NLX4 147 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms