RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.61□□□□□ -0.71
RAP1A-201ENST00000356415 CSPG4Q6UVK1 2322 aa10.61□□□□□ -0.71
RAP1A-201ENST00000356415 MDFIC2A0A1B0GVS7 189 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 VGLL3A8MV65 326 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 CREBL2O60519 120 aaPredicted RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 HPRT1P00492 218 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 IGKV1D-33P01593 117 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 IGKV1-33P01594 117 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 IGKV1-16P04430 117 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 SRD5A1P18405 259 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 UCP1P25874 307 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 RPS16P62249 146 aaKnown RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 SRPXP78539 464 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 HABP2Q14520 560 aaPredicted RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 HNF4GQ14541 408 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 TMEM187Q14656 261 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 ZNF585BQ52M93 769 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 LGI3Q8N145 548 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 UXS1Q8NBZ7 420 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 COQ8AQ8NI60 647 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 ZNF431Q8TF32 576 aaPredicted RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 PHB2Q99623 299 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 PLEKHA2Q9HB19 425 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 MAP1AP78559 2803 aaPredicted RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 A0A0A6YYJ9 748 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 PIGBOS1A0A0B4J2F0 54 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 SNRPGP15A8MWD9 76 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 SHOXO15266 292 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 VENTXO95231 258 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 CDS2O95674 445 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 SNRNP70P08621 437 aaKnown RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 RPA2P15927 270 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 DYNLT3P51808 116 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 RBMS3Q6XE24 437 aaKnown RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 LIAT1Q6ZQX7 453 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 THNSL2Q86YJ6 484 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 OR2T10Q8NGZ9 312 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 RBMXL1Q96E39 390 aaKnown RBP10.6□□□□□ -0.71
RAP1A-201ENST00000356415 AIFM2Q9BRQ8 373 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 PRR13Q9NZ81 148 aa10.6□□□□□ -0.71
RAP1A-201ENST00000356415 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 ATG12O94817 140 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 MOSP00540 346 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 HRASP01112 189 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 LGALS7P47929 136 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 AANATQ16613 207 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 ANKRD55Q3KP44 614 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 TMEM268Q5VZI3 342 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 LIN54Q6MZP7 749 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 C12orf45Q8N5I9 185 aaPredicted RBP10.59□□□□□ -0.71
RAP1A-201ENST00000356415 OSR1Q8TAX0 266 aaPredicted RBP10.59□□□□□ -0.71
RAP1A-201ENST00000356415 MITD1Q8WV92 249 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 RBPMSQ93062 196 aaKnown RBP10.59□□□□□ -0.71
RAP1A-201ENST00000356415 EAF1Q96JC9 268 aaPredicted RBP10.59□□□□□ -0.71
RAP1A-201ENST00000356415 HARBI1Q96MB7 349 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 TMEM56Q96MV1 263 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 RNF5Q99942 180 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 ALG5Q9Y673 324 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 TMEM56-RWDD3S4R434 201 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 OTOGQ6ZRI0 2925 aa10.59□□□□□ -0.71
RAP1A-201ENST00000356415 BTBD17A6NE02 478 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 H3BUX3 64 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 SSNA1O43805 119 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 S1PR2O95136 353 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 KRASP01116 189 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 NQO2P16083 231 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 TMEM11P17152 192 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 ERVK-16P61578 105 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 TMEM177Q53S58 311 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 Q6YL49 198 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 Q6ZNX1 250 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 SELENOHQ8IZQ5 122 aaKnown RBP10.58□□□□□ -0.72
RAP1A-201ENST00000356415 DMBX1Q8NFW5 382 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 RNASE11Q8TAA1 199 aaKnown RBP10.58□□□□□ -0.72
RAP1A-201ENST00000356415 R3HDM4Q96D70 268 aa10.58□□□□□ -0.72
RAP1A-201ENST00000356415 ZNF48Q96MX3 618 aaPredicted RBP10.58□□□□□ -0.72
RAP1A-201ENST00000356415 A0A0B4J293 547 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 A0A0B4J2A0 478 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 C7orf66A4D0T2 115 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 G6PCP35575 357 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 AKR1C2P52895 323 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 EBI3Q14213 229 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 SSX9Q7RTT3 188 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 SIGLECL1Q8N7X8 197 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 PIFOQ8TCI5 191 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 IL22RA2Q969J5 263 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 RRNAD1Q96FB5 475 aaKnown RBP10.57□□□□□ -0.72
RAP1A-201ENST00000356415 RITA1Q96K30 269 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 RHOVQ96L33 236 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 TSNAXQ99598 290 aaKnown RBP10.57□□□□□ -0.72
RAP1A-201ENST00000356415 OR51J1Q9H342 316 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 PRDM13Q9H4Q3 707 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 SHPKQ9UHJ6 478 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 FLNAP21333 2647 aaKnown RBP10.57□□□□□ -0.72
RAP1A-201ENST00000356415 AKAP9Q99996 3911 aa10.57□□□□□ -0.72
RAP1A-201ENST00000356415 NCBP2LA6PVI3 153 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms