RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 FKBP2P26885 142 aaKnown RBP11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ZCCHC14Q8WYQ9 949 aaKnown RBP11.47□□□□□ -0.57
TRIM4-203ENST00000355947 MRPL18Q9H0U6 180 aaKnown RBP11.47□□□□□ -0.57
TRIM4-203ENST00000355947 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.47□□□□□ -0.57
TRIM4-203ENST00000355947 MT-CO3P00414 261 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 COX6A1P12074 109 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 SSTR5P35346 364 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
TRIM4-203ENST00000355947 OR5AU1Q8NGC0 362 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 APH1AQ96BI3 265 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
TRIM4-203ENST00000355947 OPN3Q9H1Y3 402 aaPredicted RBP11.46□□□□□ -0.57
TRIM4-203ENST00000355947 IL36GQ9NZH8 169 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 RNF24Q9Y225 148 aa11.46□□□□□ -0.57
TRIM4-203ENST00000355947 ETV2O00321 342 aaPredicted RBP11.46□□□□□ -0.58
TRIM4-203ENST00000355947 DLEU1O43261 78 aa11.46□□□□□ -0.58
TRIM4-203ENST00000355947 Q6ZN92 141 aa11.46□□□□□ -0.58
TRIM4-203ENST00000355947 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.58
TRIM4-203ENST00000355947 ABHD12Q8N2K0 398 aa11.46□□□□□ -0.58
TRIM4-203ENST00000355947 CIB3Q96Q77 187 aaPredicted RBP11.46□□□□□ -0.58
TRIM4-203ENST00000355947 GNG12Q9UBI6 72 aa11.46□□□□□ -0.58
TRIM4-203ENST00000355947 DMDP11532 3685 aa11.46□□□□□ -0.58
TRIM4-203ENST00000355947 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 TMEM250H0YL14 139 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 CYB561P49447 251 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 HLA-DRB5Q30154 266 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 Q6ZWC4 215 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 FAM122AQ96E09 287 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 SFRP2Q96HF1 295 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 OR2J1Q9GZK6 312 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 DNAJC4Q9NNZ3 241 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 IGLV3-19P01714 112 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 PRB4P10163 310 aaPredicted RBP11.45□□□□□ -0.58
TRIM4-203ENST00000355947 TMEM183BQ1AE95 376 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 C1orf194Q5T5A4 169 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 GGNQ86UU5 652 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 DOLPP1Q86YN1 238 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 TGIF2LYQ8IUE0 185 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 BEND2Q8NDZ0 799 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 WDYHV1Q96HA8 205 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 SH2D1BO14796 132 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 SRD5A2P31213 254 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 RNASEH2CQ8TDP1 164 aaKnown RBP11.45□□□□□ -0.58
TRIM4-203ENST00000355947 LEAP2Q969E1 77 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 GALMQ96C23 342 aa11.45□□□□□ -0.58
TRIM4-203ENST00000355947 DIRC3C9JPN6 131 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 CATR1Q13166 79 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 UHRF2Q96PU4 802 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 SF3B5Q9BWJ5 86 aaKnown RBP11.44□□□□□ -0.58
TRIM4-203ENST00000355947 C1QTNF5Q9BXJ0 243 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
TRIM4-203ENST00000355947 TMEM106BQ9NUM4 274 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 CELA3BP08861 270 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 CD82P27701 267 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 MAGEA5P43359 124 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 ARG2P78540 354 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 DEFB127Q9H1M4 99 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 RPH3ALQ9UNE2 315 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 PLCE1Q9P212 2302 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
TRIM4-203ENST00000355947 OR10J4P0C629 311 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 FABP6P51161 128 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 SUMO1P63165 101 aaKnown RBP11.44□□□□□ -0.58
TRIM4-203ENST00000355947 SPATA31B1PQ5VZV4 182 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 AGBL5Q8NDL9 886 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 OR4P4Q8NGL7 312 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 STARD4Q96DR4 205 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 RIMS4Q9H426 269 aaPredicted RBP11.44□□□□□ -0.58
TRIM4-203ENST00000355947 LPAR2Q9HBW0 351 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 ZNF391Q9UJN7 358 aa11.44□□□□□ -0.58
TRIM4-203ENST00000355947 LRRC30A6NM36 301 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 MARCH11A6NNE9 402 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 ZNF253O75346 499 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 CLDN14O95500 239 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 GNG10P50151 68 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 OR4A16Q8NH70 328 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 ST6GALNAC6Q969X2 333 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 SGK494Q96LW2 274 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 CBY1Q9Y3M2 126 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 NBASA2RRP1 2371 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 CD1BP29016 333 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 CHRNB4P30926 498 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 SRP14P37108 136 aaKnown RBP11.43□□□□□ -0.58
TRIM4-203ENST00000355947 RAB7AP51149 207 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 RPL31P62899 125 aaKnown RBP11.43□□□□□ -0.58
TRIM4-203ENST00000355947 RAB30Q15771 203 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 PLEKHA3Q9HB20 300 aa11.43□□□□□ -0.58
TRIM4-203ENST00000355947 OR7C2O60412 319 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 GGCTO75223 188 aaKnown RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 SRFP11831 508 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 GATA2P23769 480 aaPredicted RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 HNRNPA3P51991 378 aaKnown RBP11.42□□□□□ -0.58
TRIM4-203ENST00000355947 KRTCAP3Q53RY4 240 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 LYSMD4Q5XG99 296 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 LCN12Q6JVE5 192 aa11.42□□□□□ -0.58
TRIM4-203ENST00000355947 FOXL2NBQ6ZUU3 175 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms