RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 TRAF4Q9BUZ4 470 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-202ENST00000355480 PAM16Q9Y3D7 125 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 ZIC3O60481 467 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 ZG16O60844 167 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 NPBWR2P48146 333 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 DPH3Q96FX2 82 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 SIGLEC12Q96PQ1 595 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 ATG101Q9BSB4 218 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 COL4A5P29400 1685 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 TRBV5-7A0A0A0MS05 114 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 CD74P04233 296 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 VKORC1L1Q8N0U8 176 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 A0A087X0M5 115 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 A0A1B0GX30 115 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 GPX1P07203 203 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 MDKP21741 143 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-202ENST00000355480 ANOS1P23352 680 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 CDC42EP3Q9UKI2 254 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 SEC16AO15027 2179 aa15.42■□□□□ 0.06
COL18A1-202ENST00000355480 UBE2V2Q15819 145 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 TMEM54Q969K7 222 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 POM121Q96HA1 1249 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 G6PC2Q9NQR9 355 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 ASXL3Q9C0F0 2248 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 DOCK5Q9H7D0 1870 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 C7orf66A4D0T2 115 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 RFPL3SP0C7P2 107 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 NPPCP23582 126 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 FAM3BP58499 235 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-202ENST00000355480 RELQ04864 619 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-202ENST00000355480 TNFRSF9Q07011 255 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 C2orf83Q53S99 150 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 RAB37Q96AX2 223 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 FOCADQ5VW36 1801 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 DIRC3C9JPN6 131 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 IGLV3-21P80748 117 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-202ENST00000355480 FAM27E3Q08E93 113 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 WDR25Q64LD2 544 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-202ENST00000355480 Q96M66 194 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 CD99P14209 185 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 CRYBA2P53672 197 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 ADIPOQQ15848 244 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 MOB4Q9Y3A3 225 aa15.41■□□□□ 0.06
COL18A1-202ENST00000355480 TMEM30BQ3MIR4 351 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 SMDT1Q9H4I9 107 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 IGHV3-35A0A0C4DH35 117 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 FAM90A26D6RGX4 464 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 C1QL1O75973 258 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 TSPOP30536 169 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 MEF2BQ02080 365 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-202ENST00000355480 PGLYRP4Q96LB8 373 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 TXNDC17Q9BRA2 123 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 SPTA1P02549 2419 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 CELA3AP09093 270 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 PRSS8Q16651 343 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 TIMM23BQ5SRD1 257 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 PET117Q6UWS5 81 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-202ENST00000355480 C17orf51A8MQB3 221 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 H3BTX0 84 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 CFDP00746 253 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-202ENST00000355480 F12P00748 615 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-202ENST00000355480 ZNRF1Q8ND25 227 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 SVILO95425 2214 aa15.4■□□□□ 0.06
COL18A1-202ENST00000355480 C8orf88P0DMB2 117 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 CXCL2P19875 107 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 TCF19Q9Y242 345 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 TMEM177Q53S58 311 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 OR5P3Q8WZ94 311 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 OR51M1Q9H341 326 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 NUDT3O95989 172 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 IGHMP01871 453 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 OR51G1Q8NGK1 321 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 SLC25A38Q96DW6 304 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 GALNT14Q96FL9 552 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 ACAA1P09110 424 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-202ENST00000355480 MUC1P15941 1255 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-202ENST00000355480 SNRPD3P62318 126 aaKnown RBP15.39■□□□□ 0.05
COL18A1-202ENST00000355480 C10orf128Q5T292 105 aa15.39■□□□□ 0.05
COL18A1-202ENST00000355480 PEAR1Q5VY43 1037 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-202ENST00000355480 IGHV3-48P01763 117 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 GDF9O60383 454 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 HKR1P10072 659 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 CEACAM1P13688 526 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 LCN2P80188 198 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 LINC00862A6NCI5 91 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 H7C2G1 150 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 IGKV3-20P01619 116 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 ZNF818PQ6ZRF7 136 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 TMEM106BQ9NUM4 274 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 POLR2AP24928 1970 aaKnown RBP15.38■□□□□ 0.05
COL18A1-202ENST00000355480 KLF4O43474 513 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 MT-ND6P03923 174 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 ZNF883P0CG24 379 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 GLRXP35754 106 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 RPS20P60866 119 aaKnown RBP15.38■□□□□ 0.05
COL18A1-202ENST00000355480 ABHD17AQ96GS6 310 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 LINC00470Q9BZP3 86 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 ARL14EPLP0DKL9 152 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms