RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 C1QTNF12Q5T7M4 302 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 SLC35E4Q6ICL7 350 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 PPOXP50336 477 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 LOC389332A0A1B0GUA5 103 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 DLL1O00548 723 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 NAT1P18440 290 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 REG1AP05451 166 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 ARL14EPLP0DKL9 152 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 DHRS11Q6UWP2 260 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 MEGF10Q96KG7 1140 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 PTGDSP41222 190 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 RND2P52198 227 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 RTN4RQ9BZR6 473 aa13.66□□□□□ -0.22
PTPN11-201ENST00000351677 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 FAM90A26D6RGX4 464 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 CALHM1Q8IU99 346 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 TMEM171Q8WVE6 324 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 APC2O95996 2303 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 IBA57Q5T440 356 aaKnown RBP13.65□□□□□ -0.22
PTPN11-201ENST00000351677 ZNRF1Q8ND25 227 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 TBX15Q96SF7 602 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 MPTX1A8MV57 137 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 TCTAP57738 103 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 HSPE1P61604 102 aaKnown RBP13.65□□□□□ -0.22
PTPN11-201ENST00000351677 ZNF362Q5T0B9 420 aaPredicted RBP13.65□□□□□ -0.22
PTPN11-201ENST00000351677 LSM10Q969L4 123 aaKnown RBP13.65□□□□□ -0.22
PTPN11-201ENST00000351677 LINC00470Q9BZP3 86 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 RPL7P18124 248 aaKnown RBP13.65□□□□□ -0.22
PTPN11-201ENST00000351677 PKIAP61925 76 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 PQLC2Q6ZP29 291 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 JPT1Q9UK76 154 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 CBY1Q9Y3M2 126 aa13.65□□□□□ -0.22
PTPN11-201ENST00000351677 IGHV3-48P01763 117 aa13.65□□□□□ -0.23
PTPN11-201ENST00000351677 MRPL37Q9BZE1 423 aaKnown RBP13.65□□□□□ -0.23
PTPN11-201ENST00000351677 LYPD3O95274 346 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 LAMTOR1Q6IAA8 161 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 QTRT1Q9BXR0 403 aaKnown RBP13.64□□□□□ -0.23
PTPN11-201ENST00000351677 PGPA6NDG6 321 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 CORTO00230 105 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 RBPMS2Q6ZRY4 209 aaKnown RBP13.64□□□□□ -0.23
PTPN11-201ENST00000351677 TM2D1Q9BX74 207 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 DIRC3C9JPN6 131 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 ZNF735P0CB33 412 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 SSX8Q7RTT4 187 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 TMEM45BQ96B21 275 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 PRR32B1ATL7 298 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 HOXA4Q00056 320 aaPredicted RBP13.64□□□□□ -0.23
PTPN11-201ENST00000351677 FADS6Q8N9I5 356 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 SMIM8Q96KF7 97 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 TCF19Q9Y242 345 aa13.64□□□□□ -0.23
PTPN11-201ENST00000351677 Q6ZT83 130 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 ANK1P16157 1881 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 A0A1B0GTI1 187 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 RPL13AP40429 203 aaKnown RBP13.63□□□□□ -0.23
PTPN11-201ENST00000351677 FXYD3Q14802 87 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 MESP1Q9BRJ9 268 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 RTBDNQ9BSG5 229 aaPredicted RBP13.63□□□□□ -0.23
PTPN11-201ENST00000351677 HSPB8Q9UJY1 196 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 ZNF430Q9H8G1 570 aaPredicted RBP13.63□□□□□ -0.23
PTPN11-201ENST00000351677 PROB1E7EW31 1015 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 RPL39P5Q59GN2 51 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 MMD2Q8IY49 270 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 EIF4E3Q8N5X7 224 aaKnown RBP13.63□□□□□ -0.23
PTPN11-201ENST00000351677 OR4A5Q8NH83 315 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 DOCK4Q8N1I0 1966 aa13.63□□□□□ -0.23
PTPN11-201ENST00000351677 HSPB9Q9BQS6 159 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 SCNM1Q9BWG6 230 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 UMODP07911 640 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 BTCP35070 178 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 TWIST1Q15672 202 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 DCAF16Q9NXF7 216 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 IGFBP3P17936 291 aaPredicted RBP13.62□□□□□ -0.23
PTPN11-201ENST00000351677 UCNP55089 124 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 LOXL3P58215 753 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 LRRC75BQ2VPJ9 315 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 H3BTX0 84 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 NUBP1P53384 320 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 SELENOTP62341 195 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 SPANXN1Q5VSR9 72 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 IMMP1LQ96LU5 166 aa13.62□□□□□ -0.23
PTPN11-201ENST00000351677 CGB1A6NKQ9 187 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 DGAT2L7PQ6IED9 249 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 SGK494Q96LW2 274 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 SPTA1P02549 2419 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 A8MWL6 223 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 ARF6P62330 175 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 EGR1P18146 543 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 PPIAL4CA0A0B4J2A2 164 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 PPIAL4GP0DN37 164 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 CRYBB3P26998 211 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 CLDN18P56856 261 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 MRPL14Q6P1L8 145 aaKnown RBP13.61□□□□□ -0.23
PTPN11-201ENST00000351677 RBM14Q96PK6 669 aaKnown RBP13.61□□□□□ -0.23
PTPN11-201ENST00000351677 DNAJC4Q9NNZ3 241 aa13.61□□□□□ -0.23
PTPN11-201ENST00000351677 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
PTPN11-201ENST00000351677 MUC15Q8N387 334 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms