RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CLDN14O95500 239 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 SEC11BP0C7V7 166 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 STAG3L3P0CL85 134 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 AMTP48728 403 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 ELOBQ15370 118 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 C1QL2Q7Z5L3 287 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 C5orf66Q9H5L9 145 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 PGLYRP1O75594 196 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-201ENST00000350148 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-201ENST00000350148 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
SMAD9-201ENST00000350148 ZNF826PQ6ZT77 177 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 PRSS33Q8NF86 280 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 GALNT14Q96FL9 552 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 SOX21Q9Y651 276 aaPredicted RBP10.34□□□□□ -0.75
SMAD9-201ENST00000350148 ASXL3Q9C0F0 2248 aa10.34□□□□□ -0.75
SMAD9-201ENST00000350148 TGIF2-C20orf24A0A0A6YYL0 155 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 UBE2L5PA0A1B0GUS4 154 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 CHST1O43916 411 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 PITX3O75364 302 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 OPN1MWP04001 364 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 FAM87AP0C7U9 286 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 OPN1MW2P0DN77 364 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 OPN1MW3P0DN78 364 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 PSG2P11465 335 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 KIR2DL2P43627 348 aaPredicted RBP10.33□□□□□ -0.76
SMAD9-201ENST00000350148 CEBPDP49716 269 aaPredicted RBP10.33□□□□□ -0.76
SMAD9-201ENST00000350148 EMP1P54849 157 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 MEF2CQ06413 473 aaPredicted RBP10.33□□□□□ -0.76
SMAD9-201ENST00000350148 NUDT10Q8NFP7 164 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 OR5AU1Q8NGC0 362 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 GYPAP02724 150 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 SPINK2P20155 84 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 PPP1CCP36873 323 aaKnown RBP10.33□□□□□ -0.76
SMAD9-201ENST00000350148 FAM27E3Q08E93 113 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 PUSL1Q8N0Z8 303 aaKnown RBP10.33□□□□□ -0.76
SMAD9-201ENST00000350148 TEX29Q8N6K0 151 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 CD8AP01732 235 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 SLC25A6P12236 298 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 LDLRAD3Q86YD5 345 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 VN1R17PQ8TDU5 208 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 RAXQ9Y2V3 346 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 PDE6DO43924 150 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 DKK1O94907 266 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 MTCH1Q9NZJ7 389 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 ALPK3Q96L96 1907 aa10.33□□□□□ -0.76
SMAD9-201ENST00000350148 EWSR1Q01844 656 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMAD9-201ENST00000350148 NHLH1Q02575 133 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 ZNF319Q9P2F9 582 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 WSB1Q9Y6I7 421 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 IGHV1-69-2A0A0G2JMI3 117 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 OR5G3P0C626 314 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 UBE2G2P60604 165 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 RNASEKQ6P5S7 137 aaKnown RBP10.32□□□□□ -0.76
SMAD9-201ENST00000350148 OR1L6Q8NGR2 347 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 OR1L4Q8NGR5 311 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 OR1L8Q8NGR8 309 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 MRGPRFQ96AM1 343 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 HES4Q9HCC6 221 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 NAGKQ9UJ70 344 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 H3BP45 60 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
SMAD9-201ENST00000350148 ARL16Q0P5N6 197 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 ZNF660Q6AZW8 331 aaPredicted RBP10.32□□□□□ -0.76
SMAD9-201ENST00000350148 CALHM1Q8IU99 346 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 COX7A2P2O60397 106 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 BTCP35070 178 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM187Q14656 261 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 OR52L2PQ8NGH6 319 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 CHRDL1Q9BU40 450 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 TPPP3Q9BW30 176 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM191AQ9H0A3 160 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 HIF1ANQ9NWT6 349 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 SLC45A2Q9UMX9 530 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 FABP2P12104 132 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 COX7A1P24310 79 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 MUC15Q8N387 334 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 AQP10Q96PS8 301 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 INSIG2Q9Y5U4 225 aa10.32□□□□□ -0.76
SMAD9-201ENST00000350148 IGHV1-18A0A0C4DH31 117 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 C5orf52A6NGY3 159 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 K7ENP7 123 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 SELENOHQ8IZQ5 122 aaKnown RBP10.31□□□□□ -0.76
SMAD9-201ENST00000350148 OR10A7Q8NGE5 316 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 DBX1A6NMT0 343 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 SLC17A3O00476 420 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 IGHV3-13P01766 116 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 RPL7P18124 248 aaKnown RBP10.31□□□□□ -0.76
SMAD9-201ENST00000350148 CSN1S1P47710 185 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 DYNLT3P51808 116 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 DLK1P80370 383 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 DOK5Q9P104 306 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 NDUFS6O75380 124 aaKnown RBP10.31□□□□□ -0.76
SMAD9-201ENST00000350148 RHOBP62745 196 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 CACNA1EQ15878 2313 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 OR1L1Q8NH94 360 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 TMEM186Q96B77 213 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 H3BVH4 76 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 COX6B1P14854 86 aa10.31□□□□□ -0.76
SMAD9-201ENST00000350148 TCTAP57738 103 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms