RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 FOXB1Q99853 325 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 DEPPQ9NTK1 212 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
LMNA-201ENST00000347559 A0A1W2PPC4 97 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 K7EN84 100 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 DEGS1O15121 323 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 TOMM40O96008 361 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 TNFSF4P23510 183 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 RPEL1Q2QD12 228 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 TMEM240Q5SV17 173 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 SLC23A3Q6PIS1 610 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 DRAM1Q8N682 238 aa12.91□□□□□ -0.34
LMNA-201ENST00000347559 IGLV3-32A0A0A0MS00 114 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 A8MXE2 369 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 LGALS4P56470 323 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 SRSF7Q16629 238 aaKnown RBP eCLIP12.9□□□□□ -0.34
LMNA-201ENST00000347559 TP73-AS1Q9UF72 201 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 TRAPPC2LQ9UL33 140 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 TRAV24A0A0B4J272 114 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 ODAMA1E959 279 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 SRIP30626 198 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 AAED1Q7RTV5 226 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 SMIM15Q7Z3B0 74 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 KCNS1Q96KK3 526 aa12.9□□□□□ -0.34
LMNA-201ENST00000347559 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 RPL31P62899 125 aaKnown RBP12.89□□□□□ -0.35
LMNA-201ENST00000347559 RELBQ01201 579 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 STUMQ69YW2 141 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 MRPL54Q6P161 138 aaKnown RBP12.89□□□□□ -0.35
LMNA-201ENST00000347559 PLXDC1Q8IUK5 500 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 ST6GALNAC6Q969X2 333 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 FAM166BA8MTA8 275 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 CELA2AP08217 269 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 FXYD3Q14802 87 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 Q56UQ5 140 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 RIPPLY2Q5TAB7 128 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 FAM58AQ8N1B3 248 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 HSPB7Q9UBY9 170 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 ZNF391Q9UJN7 358 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 R4GN57 208 aa12.89□□□□□ -0.35
LMNA-201ENST00000347559 IGHV3-64DA0A0J9YX35 117 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 TIAF1O95411 115 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 MRPL21Q7Z2W9 205 aaKnown RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 C19orf25Q9UFG5 118 aaPredicted RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 EYSQ5T1H1 3165 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 LRRC30A6NM36 301 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 PMS2P5A8MQ11 134 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 C5orf67F2Z3F1 127 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 PRRX1P54821 245 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 FAM53AQ6NSI3 398 aaPredicted RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 FADS6Q8N9I5 356 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 ZNF596Q8TC21 504 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 RNF138Q8WVD3 245 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 FAM122AQ96E09 287 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 GMPPAQ96IJ6 420 aaPredicted RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 CHRNA10Q9GZZ6 450 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 GSX1Q9H4S2 264 aaPredicted RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 DLL3Q9NYJ7 618 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 LRP5LA4QPB2 252 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 FAM90A26D6RGX4 464 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 S1PR2O95136 353 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 CLDN14O95500 239 aa12.88□□□□□ -0.35
LMNA-201ENST00000347559 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.88□□□□□ -0.35
LMNA-201ENST00000347559 RRHO14718 337 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 CA2P00918 260 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 CA6P23280 308 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 CCR5P51681 352 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 MRPS21P82921 87 aaKnown RBP12.87□□□□□ -0.35
LMNA-201ENST00000347559 NIT1Q86X76 327 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 MRGPRDQ8TDS7 321 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 CLEC7AQ9BXN2 247 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 YTHDF2Q9Y5A9 579 aaKnown RBP12.87□□□□□ -0.35
LMNA-201ENST00000347559 CHCHD2Q9Y6H1 151 aaPredicted RBP12.87□□□□□ -0.35
LMNA-201ENST00000347559 A0A096LPE4 126 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 A0A1W2PPZ6 126 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 DUX1O43812 170 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 PDLIM3Q53GG5 364 aaPredicted RBP12.87□□□□□ -0.35
LMNA-201ENST00000347559 Q6ZS52 159 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 Q8NFD4 153 aa12.87□□□□□ -0.35
LMNA-201ENST00000347559 PSG1P11464 419 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 OR2M7Q8NG81 312 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 C5orf49A4QMS7 147 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 CCL3P10147 92 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 FKBP2P26885 142 aaKnown RBP12.86□□□□□ -0.35
LMNA-201ENST00000347559 CD1BP29016 333 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 LINC00205P59089 165 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 RPL19P84098 196 aaKnown RBP12.86□□□□□ -0.35
LMNA-201ENST00000347559 TRIM61Q5EBN2 209 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 MIC13Q5XKP0 118 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 WDR74Q6RFH5 385 aaPredicted RBP12.86□□□□□ -0.35
LMNA-201ENST00000347559 DOLPP1Q86YN1 238 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 NUDT10Q8NFP7 164 aa12.86□□□□□ -0.35
LMNA-201ENST00000347559 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms