RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CXXC4Q9H2H0 198 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 UMODP07911 640 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 OR2V2Q96R30 315 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 TTTY12Q9BZ98 90 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 NPIPB13A6NJU9 1138 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 NPIPB4C9JG80 1138 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 GCSHP23434 173 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 G6PCP35575 357 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 LYG1Q8N1E2 194 aa13.31□□□□□ -0.28
SRPK1-201ENST00000346162 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
SRPK1-201ENST00000346162 RCC1LQ96I51 464 aaKnown RBP13.31□□□□□ -0.28
SRPK1-201ENST00000346162 TRAV39A0A0B4J263 110 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 C3orf80F5H4A9 247 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 CXorf1O96002 111 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 ADH4P08319 380 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 RBM11P57052 281 aaKnown RBP13.3□□□□□ -0.28
SRPK1-201ENST00000346162 SIGMAR1Q99720 223 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 QTRT1Q9BXR0 403 aaKnown RBP13.3□□□□□ -0.28
SRPK1-201ENST00000346162 CLN8Q9UBY8 286 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 C9JQL5 133 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 MPZP25189 248 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 PCOLCEQ15113 449 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 ADTRPQ96IZ2 230 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 TMEM222Q9H0R3 208 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 VWA8A3KMH1 1905 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 SMPD2O60906 423 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 GNB1P62873 340 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 POM121L2Q96KW2 1035 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 WNT5BQ9H1J7 359 aa13.3□□□□□ -0.28
SRPK1-201ENST00000346162 RPL36A-HNRNPH2H7BZ11 118 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 SFRP2Q96HF1 295 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 OR8B2Q96RD0 313 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 BARX1Q9HBU1 254 aaPredicted RBP13.29□□□□□ -0.28
SRPK1-201ENST00000346162 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 H3BVH4 76 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 VENTXO95231 258 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 BTF3P20290 206 aaKnown RBP13.29□□□□□ -0.28
SRPK1-201ENST00000346162 GPR179Q6PRD1 2367 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 MMD2Q8IY49 270 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 ORAOV1Q8WV07 137 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 IGHV3-7P01780 117 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 IGHMP01871 453 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 AMMECR1LQ6DCA0 310 aa13.29□□□□□ -0.28
SRPK1-201ENST00000346162 IGSF23A1L1A6 192 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 TEX38Q6PEX7 206 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 FAM19A2Q8N3H0 131 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 COX6A1P12074 109 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 ZNF137PP52743 207 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 MDP1Q86V88 176 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 SLC25A40Q8TBP6 338 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 OR2W1Q9Y3N9 320 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 TRPM7Q96QT4 1865 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 KIF26BQ2KJY2 2108 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 NDUFB3O43676 98 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 OR2J3O76001 311 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 SLC25A5P05141 298 aaKnown RBP13.28□□□□□ -0.28
SRPK1-201ENST00000346162 CD33P20138 364 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 RPL23P62829 140 aaKnown RBP13.28□□□□□ -0.28
SRPK1-201ENST00000346162 TNFAIP6P98066 277 aaPredicted RBP13.28□□□□□ -0.28
SRPK1-201ENST00000346162 FOXC1Q12948 553 aa13.28□□□□□ -0.28
SRPK1-201ENST00000346162 SPAARA0A1B0GVQ0 90 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 CA11O75493 328 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 PSG2P11465 335 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 GAGE1Q13065 139 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 TTC32Q5I0X7 151 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 CDPF1Q6NVV7 123 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 ZNF488Q96MN9 340 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 SPCS1Q9Y6A9 102 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
SRPK1-201ENST00000346162 LRRC10Q5BKY1 277 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 TMEM56Q96MV1 263 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 TMEM70Q9BUB7 260 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 TMEM187Q14656 261 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
SRPK1-201ENST00000346162 TRBV6-7A0A0A0MS04 114 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 TRBV9A0A0B4J1U6 114 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 K7N7A8 449 aa13.27□□□□□ -0.29
SRPK1-201ENST00000346162 ATXN7O15265 892 aaPredicted RBP13.27□□□□□ -0.29
SRPK1-201ENST00000346162 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
SRPK1-201ENST00000346162 SNAI2O43623 268 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 AGFG2O95081 481 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 UBE2L3P68036 154 aaKnown RBP13.26□□□□□ -0.29
SRPK1-201ENST00000346162 RELBQ01201 579 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 TMEM242Q9NWH2 141 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 LINC00869P0C866 280 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 RTBDNQ9BSG5 229 aaPredicted RBP13.26□□□□□ -0.29
SRPK1-201ENST00000346162 FNDC4Q9H6D8 234 aaPredicted RBP13.26□□□□□ -0.29
SRPK1-201ENST00000346162 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 INO80CQ6PI98 192 aaPredicted RBP13.26□□□□□ -0.29
SRPK1-201ENST00000346162 LOXL4Q96JB6 756 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 GPHA2Q96T91 129 aa13.26□□□□□ -0.29
SRPK1-201ENST00000346162 TMEM14DPA8MWL7 114 aa13.25□□□□□ -0.29
SRPK1-201ENST00000346162 H3BUT2 72 aa13.25□□□□□ -0.29
SRPK1-201ENST00000346162 ZNHIT1O43257 154 aa13.25□□□□□ -0.29
SRPK1-201ENST00000346162 LYPD3O95274 346 aa13.25□□□□□ -0.29
SRPK1-201ENST00000346162 IBA57Q5T440 356 aaKnown RBP13.25□□□□□ -0.29
SRPK1-201ENST00000346162 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms