RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 NUDT3O95989 172 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 UCP1P25874 307 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 GAS1P54826 345 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 HSPE1P61604 102 aaKnown RBP14.96□□□□□ -0.01
SPAST-202ENST00000345662 RPL23P62829 140 aaKnown RBP14.96□□□□□ -0.01
SPAST-202ENST00000345662 SPANXN1Q5VSR9 72 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 HIST3H2BBQ8N257 126 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 NPCDR1Q9BY65 106 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 TCFL5Q9UL49 500 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 P2RY6Q15077 328 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 ZNF658BQ4V348 819 aaPredicted RBP14.96□□□□□ -0.01
SPAST-202ENST00000345662 C1QL4Q86Z23 238 aa14.96□□□□□ -0.01
SPAST-202ENST00000345662 A1L4Q6 167 aa14.96□□□□□ -0.02
SPAST-202ENST00000345662 DLL1O00548 723 aa14.96□□□□□ -0.02
SPAST-202ENST00000345662 CRYABP02511 175 aaKnown RBP14.96□□□□□ -0.02
SPAST-202ENST00000345662 SSTR5P35346 364 aa14.96□□□□□ -0.02
SPAST-202ENST00000345662 CA7P43166 264 aa14.96□□□□□ -0.02
SPAST-202ENST00000345662 ARF6P62330 175 aa14.96□□□□□ -0.02
SPAST-202ENST00000345662 ZNF430Q9H8G1 570 aaPredicted RBP14.96□□□□□ -0.02
SPAST-202ENST00000345662 PIKFYVEQ9Y2I7 2098 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 DNAJC13O75165 2243 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 FAM157AC9JC47 383 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 PLAUP00749 431 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 NPBWR2P48146 333 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 ST6GALNAC3Q8NDV1 305 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 OR1N2Q8NGR9 330 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 SSBP3Q9BWW4 388 aaPredicted RBP14.95□□□□□ -0.02
SPAST-202ENST00000345662 WDR54Q9H977 334 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 F11RQ9Y624 299 aaKnown RBP14.95□□□□□ -0.02
SPAST-202ENST00000345662 IGHV3OR15-7A0A075B7D8 119 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 AGFG2O95081 481 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 MGPP08493 103 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 DGAT2L7PQ6IED9 249 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 BHLHA15Q7RTS1 189 aaPredicted RBP14.95□□□□□ -0.02
SPAST-202ENST00000345662 ARL6IP6Q8N6S5 226 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 INSIG2Q9Y5U4 225 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 MYO16Q9Y6X6 1858 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 C9orf50Q5SZB4 431 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 KCNS1Q96KK3 526 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 FOXD3Q9UJU5 478 aaPredicted RBP14.95□□□□□ -0.02
SPAST-202ENST00000345662 IGHV3-21A0A0B4J1V1 117 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 SLC17A3O00476 420 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 APELAP0DMC3 54 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 STARD6P59095 220 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 IGLV3-21P80748 117 aaPredicted RBP14.95□□□□□ -0.02
SPAST-202ENST00000345662 DRAM1Q8N682 238 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 PRDM13Q9H4Q3 707 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 TMEM106BQ9NUM4 274 aa14.95□□□□□ -0.02
SPAST-202ENST00000345662 A0A1W2PQF6 199 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 K7N7A8 449 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 SMIM13P0DJ93 91 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 MPZP25189 248 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 NABP2Q9BQ15 211 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 HBBP68871 147 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 CALHM1Q8IU99 346 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 STPG3Q8N7X2 389 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 NEU1Q99519 415 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 LINC00114Q6XXX2 140 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 FOXL2P58012 376 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 ZNF788Q6ZQV5 615 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 ZNF501Q96CX3 271 aaPredicted RBP14.94□□□□□ -0.02
SPAST-202ENST00000345662 TCF19Q9Y242 345 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 KNTC1P50748 2209 aa14.94□□□□□ -0.02
SPAST-202ENST00000345662 SERF1AO75920 110 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 CT55Q8WUE5 264 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 MPV17P39210 176 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 LGALS7P47929 136 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 KRTCAP3Q53RY4 240 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 MAP1LC3AQ9H492 121 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 SHISA7A6NL88 538 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 FAM117AQ9C073 453 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 PRDM14Q9GZV8 571 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 CACNA1IQ9P0X4 2223 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 ATG2BQ96BY7 2078 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.93□□□□□ -0.02
SPAST-202ENST00000345662 ABHD12Q8N2K0 398 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 GCSAMQ8N6F7 178 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 PLSCR2Q9NRY7 297 aa14.93□□□□□ -0.02
SPAST-202ENST00000345662 REG1BP48304 166 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 SAPCD1Q5SSQ6 148 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 MRPL32Q9BYC8 188 aaKnown RBP14.92□□□□□ -0.02
SPAST-202ENST00000345662 TRIP12Q14669 1992 aaPredicted RBP14.92□□□□□ -0.02
SPAST-202ENST00000345662 RPL8P62917 257 aaKnown RBP14.92□□□□□ -0.02
SPAST-202ENST00000345662 TTC32Q5I0X7 151 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 GFI1Q99684 422 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 SRSF12Q8WXF0 261 aaKnown RBP14.92□□□□□ -0.02
SPAST-202ENST00000345662 NDUFS6O75380 124 aaKnown RBP14.92□□□□□ -0.02
SPAST-202ENST00000345662 RIPPLY2Q5TAB7 128 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 RTN4RQ9BZR6 473 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 NRN1Q9NPD7 142 aa14.92□□□□□ -0.02
SPAST-202ENST00000345662 STRCP1A6NGW2 1772 aa14.91□□□□□ -0.02
SPAST-202ENST00000345662 MKRN2OSH3BPM6 223 aa14.91□□□□□ -0.02
SPAST-202ENST00000345662 COX6CP09669 75 aa14.91□□□□□ -0.02
SPAST-202ENST00000345662 RPL27AP46776 148 aaKnown RBP14.91□□□□□ -0.02
SPAST-202ENST00000345662 FOXA3P55318 350 aaPredicted RBP14.91□□□□□ -0.02
SPAST-202ENST00000345662 NUTF2P61970 127 aaKnown RBP14.91□□□□□ -0.02
SPAST-202ENST00000345662 ZNF324BQ6AW86 544 aaPredicted RBP14.91□□□□□ -0.02
SPAST-202ENST00000345662 TNFRSF19Q9NS68 423 aa14.91□□□□□ -0.02
SPAST-202ENST00000345662 FBLN5Q9UBX5 448 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms