RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 RHBDL1O75783 438 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 GNG4P50150 75 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 ATP5G2Q06055 141 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 BTN1A1Q13410 526 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 WISP1O95388 367 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 PRB3Q04118 309 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 LAMTOR1Q6IAA8 161 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF439Q8NDP4 499 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 METTL26Q96S19 204 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 PQLC2LA1A4F0 135 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 TGOLN2O43493 480 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 B2MP61769 119 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 EWSR1Q01844 656 aaKnown RBP eCLIP13.87□□□□□ -0.191e-6■■□□□ 14.1
SMARCA4-201ENST00000344626 KHDC3LQ587J8 217 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 SSMEM1Q8WWF3 244 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 SLC25A38Q96DW6 304 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 TM2D1Q9BX74 207 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 CTDSP1Q9GZU7 261 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 PPP1R3EQ9H7J1 279 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 NPVFQ9HCQ7 196 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 MANBALQ9NQG1 85 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 CLEC5AQ9NY25 188 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 GPR132Q9UNW8 380 aa13.87□□□□□ -0.19
SMARCA4-201ENST00000344626 CEACAM18A8MTB9 384 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 LY6HO94772 140 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 VSIG10L2P0DP72 767 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 MFAP4P55083 255 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF474Q6S9Z5 364 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 MS4A10Q96PG2 267 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 TMEM140Q9NV12 185 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 SHANK1Q9Y566 2161 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 ZFYVE26Q68DK2 2539 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 KBTBD11-OT1A0A1B0GTJ5 212 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 SSTR5P35346 364 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 SELENOTP62341 195 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF79Q15937 498 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 URGCP-MRPS24S4R325 110 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 HYPMO75409 117 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 ASPHD2Q6ICH7 369 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 MAPK1IP1LQ8NDC0 245 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 HSPE1P61604 102 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 MYPOPQ86VE0 399 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 STPG3Q8N7X2 389 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 LSM10Q969L4 123 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 TCEAL7Q9BRU2 100 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 RCC2Q9P258 522 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 NPIPB11E5RHQ5 1161 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 PGA5P0DJD9 388 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 HTN1P15515 57 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 UCP3P55916 312 aa13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 HOXA4Q00056 320 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 MBNL2Q5VZF2 373 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-201ENST00000344626 FAM90A26D6RGX4 464 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 KCNAB3O43448 404 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 GUK1Q16774 197 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 IL22RA2Q969J5 263 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 QTRT1Q9BXR0 403 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 NAGKQ9UJ70 344 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 FANCMQ8IYD8 2048 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 C1QL1O75973 258 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 TFPI2P48307 235 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 FAM166AQ6J272 317 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 FGFRL1Q8N441 504 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 OR4P4Q8NGL7 312 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 PSG5Q15238 335 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 LINC00052Q96N35 136 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 DUX5Q96PT3 197 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 SLC25A15Q9Y619 301 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 BMPR1BO00238 502 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 HIST1H1BP16401 226 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 LRP11Q86VZ4 500 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 OR4D10Q8NGI6 311 aa13.85□□□□□ -0.19
SMARCA4-201ENST00000344626 ANAPC1Q9H1A4 1944 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 JMJD1CQ15652 2540 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 A0A1B0GTI1 187 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 RNF223E7ERA6 249 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 PLA2G10O15496 165 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 CD1BP29016 333 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 FXYD3Q14802 87 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 CFDP00746 253 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 FREM3P0C091 2139 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 MMP26Q9NRE1 261 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 MFNGO00587 321 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 Q5PR19 223 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 RBM14Q96PK6 669 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 A0A1W2PRX2 142 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 B3GALT5-AS1P59052 145 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 HCP5Q6MZN7 132 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 UQCC3Q6UW78 93 aa13.84□□□□□ -0.19
SMARCA4-201ENST00000344626 ZNF705GA8MUZ8 300 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-201ENST00000344626 MPDU1O75352 247 aa13.83□□□□□ -0.19
SMARCA4-201ENST00000344626 TEX261Q6UWH6 196 aa13.83□□□□□ -0.19
SMARCA4-201ENST00000344626 NUP37Q8NFH4 326 aa13.83□□□□□ -0.19
SMARCA4-201ENST00000344626 EEF1AKMT3Q96AZ1 226 aa13.83□□□□□ -0.19
SMARCA4-201ENST00000344626 KLHDC3Q9BQ90 382 aa13.83□□□□□ -0.19
SMARCA4-201ENST00000344626 PTPRDP23468 1912 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 MARCH11A6NNE9 402 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms