RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 PMCHP20382 165 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 CD40P25942 277 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 PPOXP50336 477 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 SNRPD3P62318 126 aaKnown RBP6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TGIF1Q15583 401 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 HLA-DRB5Q30154 266 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 LBHQ53QV2 105 aaPredicted RBP6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TM4SF20Q53R12 229 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 ZNF385CQ66K41 422 aaPredicted RBP6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM88Q6PEY1 159 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 POC1AQ8NBT0 407 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM106BQ9NUM4 274 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 MRPL22Q9NWU5 206 aaKnown RBP6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 PXMP4Q9Y6I8 212 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 IGKV1D-42A0A075B6H8 117 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM14DPA8MWL7 114 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 ZNF253O75346 499 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 LINC00869P0C866 280 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 SULT1A2P50226 295 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 CLDN18P56856 261 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 ERVS71-1P61550 626 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 ZFP36L1Q07352 338 aaKnown RBP6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM252Q8N6L7 170 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 SSMEM1Q8WWF3 244 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM37Q8WXS4 190 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 SMIM8Q96KF7 97 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 C16orf92Q96LL3 132 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TNFRSF19Q9NS68 423 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TREM2Q9NZC2 230 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 KCNK7Q9Y2U2 307 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 KLHDC2Q9Y2U9 406 aa6.61□□□□□ -1.35
ATP2B4-201ENST00000341360 TRGC1P0CF51 173 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 SCGB1C2P0DMR2 95 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 BCL2P10415 239 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 ATP6V0CP27449 155 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 DLX1P56177 255 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 ACSF3Q4G176 576 aaPredicted RBP6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 SLC25A38Q96DW6 304 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 PTPRDP23468 1912 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 CREBBPQ92793 2442 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 ABCA4P78363 2273 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 GPR179Q6PRD1 2367 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 TCAPO15273 167 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 OR10J1P30954 320 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 MAS1LP35410 378 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 RND3P61587 244 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 HIST3H3Q16695 136 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 SAPCD1Q5SSQ6 148 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 LRP11Q86VZ4 500 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 NUP37Q8NFH4 326 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 KLK13Q9UKR3 277 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 ATG2BQ96BY7 2078 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 C8orf88P0DMB2 117 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 VSIG10L2P0DP72 767 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 FAM3BP58499 235 aaPredicted RBP6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 RPS11P62280 158 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 LINC01590Q5TEZ4 76 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 ABLIM2Q6H8Q1 611 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 OR4A47Q6IF82 309 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 WDFY1Q8IWB7 410 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 TNFRSF14Q92956 283 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 NRTNQ99748 197 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM140Q9NV12 185 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 CHD5Q8TDI0 1954 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 DOPEY2Q9Y3R5 2298 aa6.6□□□□□ -1.35
ATP2B4-201ENST00000341360 CD8AP01732 235 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 HSPB1P04792 205 aaKnown RBP6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 NPPCP23582 126 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 TOMM20LQ6UXN7 152 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 OR51G1Q8NGK1 321 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 PSMG3Q9BT73 122 aaPredicted RBP6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 TM2D1Q9BX74 207 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 SRXN1Q9BYN0 137 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 TMEM189A5PLL7 270 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 NTN3O00634 580 aaPredicted RBP6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 PAGE4O60829 102 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 HLA-DQA1P01909 254 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 CAMPP49913 170 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 OR4X2Q8NGF9 303 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 C1QTNF5Q9BXJ0 243 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 DNAJC4Q9NNZ3 241 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 PLSCR2Q9NRY7 297 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 LINC00312Q9Y6C7 94 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 COL6A6A6NMZ7 2263 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 SCN8AQ9UQD0 1980 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 IQCF6A8MYZ5 107 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 PGLYRP1O75594 196 aaPredicted RBP6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 CD74P04233 296 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 CMC4P56277 68 aaPredicted RBP6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 VAMP3Q15836 100 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 C2CD4CQ8TF44 421 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 FAM168AQ92567 244 aa6.59□□□□□ -1.35
ATP2B4-201ENST00000341360 MARCH11A6NNE9 402 aa6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 SPINK9Q5DT21 86 aa6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 FGFRL1Q8N441 504 aa6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 AQP10Q96PS8 301 aa6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 TMEM70Q9BUB7 260 aa6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 COL25A1Q9BXS0 654 aaPredicted RBP6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 PARD6AQ9NPB6 346 aa6.59□□□□□ -1.36
ATP2B4-201ENST00000341360 FBLN5Q9UBX5 448 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms