RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 MCEMP1Q8IX19 187 aa16.92■□□□□ 0.3
UBC-201ENST00000339647 ZNF808Q8N4W9 903 aaPredicted RBP16.92■□□□□ 0.3
UBC-201ENST00000339647 APOBEC3DQ96AK3 386 aaPredicted RBP16.92■□□□□ 0.3
UBC-201ENST00000339647 CCDC74BQ96LY2 380 aa16.92■□□□□ 0.3
UBC-201ENST00000339647 R4GN57 208 aa16.92■□□□□ 0.3
UBC-201ENST00000339647 C17orf112F2Z3M2 114 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 FCN1O00602 326 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 S1PR2O95136 353 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 EPHA8P29322 1005 aaPredicted RBP16.91■□□□□ 0.3
UBC-201ENST00000339647 IER3P46695 156 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 FOXG1P55316 489 aaPredicted RBP16.91■□□□□ 0.3
UBC-201ENST00000339647 MRPL14Q6P1L8 145 aaKnown RBP16.91■□□□□ 0.3
UBC-201ENST00000339647 Q6P435 159 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 LINC00596Q86U02 117 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 OR1L6Q8NGR2 347 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.91■□□□□ 0.3
UBC-201ENST00000339647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 RFPL3SP0C7P2 107 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 RNASE8Q8TDE3 154 aaKnown RBP16.91■□□□□ 0.3
UBC-201ENST00000339647 LRFN3Q9BTN0 628 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 SH2D2AQ9NP31 389 aa16.91■□□□□ 0.3
UBC-201ENST00000339647 A0A1W2PPV4 95 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 DNPH1O43598 174 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 SERPINA7P05543 415 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 P0C879 139 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 COL8A2P25067 703 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 PSG7Q13046 419 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 VWC2Q2TAL6 325 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 C5orf30Q96GV9 206 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 QTRT1Q9BXR0 403 aaKnown RBP16.9■□□□□ 0.3
UBC-201ENST00000339647 FREM2Q5SZK8 3169 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 TNRC6AQ8NDV7 1962 aaKnown RBP16.9■□□□□ 0.3
UBC-201ENST00000339647 IGHV1-45A0A0A0MS14 117 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 DIRC3C9JPN6 131 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 RBMXL2O75526 392 aaKnown RBP16.9■□□□□ 0.3
UBC-201ENST00000339647 SPATA45Q537H7 98 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 SIGLECL1Q8N7X8 197 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 GTF3C1Q12789 2109 aa16.9■□□□□ 0.3
UBC-201ENST00000339647 A0A1W2PQM1 296 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 LNP1A1A4G5 178 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 ARL14EPLP0DKL9 152 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 TDGF1P13385 188 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 WIPI1Q5MNZ9 446 aaPredicted RBP16.89■□□□□ 0.29
UBC-201ENST00000339647 AGBL5Q8NDL9 886 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 K7EN84 100 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 CTRLP40313 264 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 GUSBP11Q6P575 273 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 IMMP1LQ96LU5 166 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 IL36BQ9NZH7 164 aa16.89■□□□□ 0.29
UBC-201ENST00000339647 MED12LQ86YW9 2145 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 C17orf98A8MV24 154 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 SNURFLB1AK76 121 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 CCL25O15444 150 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 GPX1P07203 203 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 BRWD1-AS2P59051 145 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 LINC00205P59089 165 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 ZNF497Q6ZNH5 498 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 Q6ZVH6 145 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 OR4B1Q8NGF8 309 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 GNB4Q9HAV0 340 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 FRYQ5TBA9 3013 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 IGHV5-10-1A0A0J9YXX1 117 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 IGHEP01854 428 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 RPS19BP1Q86WX3 136 aaKnown RBP16.88■□□□□ 0.29
UBC-201ENST00000339647 OR2D2Q9H210 308 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 OCIAD1Q9NX40 245 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 CACNA1DQ01668 2161 aa16.88■□□□□ 0.29
UBC-201ENST00000339647 RNF212BA8MTL3 300 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 RRHO14718 337 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 OR2H2O95918 312 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 OR5G3P0C626 314 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 CA6P23280 308 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 CCL7P80098 99 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 C1orf174Q8IYL3 243 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 DEPPQ9NTK1 212 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 SLC45A2Q9UMX9 530 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 TBL2Q9Y4P3 447 aaKnown RBP16.87■□□□□ 0.29
UBC-201ENST00000339647 YLPM1P49750 1951 aaKnown RBP16.87■□□□□ 0.29
UBC-201ENST00000339647 COX6A1P12074 109 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 SUMO1P63165 101 aaKnown RBP16.87■□□□□ 0.29
UBC-201ENST00000339647 Q0VG73 95 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 RNF2Q99496 336 aa16.87■□□□□ 0.29
UBC-201ENST00000339647 IGHV3-64DA0A0J9YX35 117 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 C20orf202A1L168 122 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 SPINK4O60575 86 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 SRD5A2P31213 254 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 LGALS4P56470 323 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 GNG3P63215 75 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 ARL6IP6Q8N6S5 226 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 ZNF703Q9H7S9 590 aaPredicted RBP16.86■□□□□ 0.29
UBC-201ENST00000339647 WDR83OSQ9Y284 106 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 TNRC6BQ9UPQ9 1833 aaKnown RBP16.86■□□□□ 0.29
UBC-201ENST00000339647 DOCK7Q96N67 2140 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 LOC102723996A0A087X1L8 192 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 TRAV34A0A0B4J273 112 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 C15orf62A8K5M9 175 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 CD1BP29016 333 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 RBX1P62877 108 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 KIAA1644Q3SXP7 199 aa16.86■□□□□ 0.29
UBC-201ENST00000339647 KCNE4Q8WWG9 221 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms