RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 S1PR2O95136 353 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 PGA5P0DJD9 388 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 G0S2P27469 103 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 SLC35E3Q7Z769 313 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 LHFPL5Q8TAF8 219 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 FAM57AQ8TBR7 257 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 SH2D2AQ9NP31 389 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ELOVL5Q9NYP7 299 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 IDI2-AS1Q9NZ38 188 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF581Q9P0T4 197 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 CTXND1A0A1B0GTU2 59 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 BAGE3Q86Y29 109 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 BAGE2Q86Y30 109 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 OR4P4Q8NGL7 312 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 BRS3P32247 399 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 SNRPEP62304 92 aaKnown RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ABHD12Q8N2K0 398 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 H3BQ15 152 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 NDUFA2O43678 99 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 GATCO43716 136 aaKnown RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 KHDC3LQ587J8 217 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 OR1L4Q8NGR5 311 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF331Q9NQX6 463 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF320A2RRD8 509 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 XKRY2A2RUG3 117 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 DKK1O94907 266 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 NTF4P34130 210 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 TNFRSF9Q07011 255 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 ZDHHC16Q969W1 377 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 SPG11Q96JI7 2443 aa5.32□□□□□ -1.56
PRKDC-202ENST00000338368 GNB2P62879 340 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 DBX2Q6ZNG2 339 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 NDFIP1Q9BT67 221 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 DCTN5Q9BTE1 182 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 PLCE1Q9P212 2302 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 TFF1P04155 84 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 RNFT1Q5M7Z0 435 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ETFRF1Q6IPR1 90 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 PRR27Q6MZM9 219 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 NAT8Q9UHE5 227 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF835Q9Y2P0 537 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 DOK5Q9P104 306 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 MC5RP33032 325 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 B2MP61769 119 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ACSM6Q6P461 480 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 SSMEM1Q8WWF3 244 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 PLSCR4Q9NRQ2 329 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ADAMTS9Q9P2N4 1935 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 PTBP3O95758 552 aaKnown RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 HSPE1P61604 102 aaKnown RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 C17orf98A8MV24 154 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 EIF3GO75821 320 aaKnown RBP eCLIP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 SAMD13Q5VXD3 122 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM37Q8WXS4 190 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 SMIM8Q96KF7 97 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 GPR61Q9BZJ8 451 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ORM2P19652 201 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 DLK1P80370 383 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ID3Q02535 119 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 WDR82Q6UXN9 313 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 STARD4Q96DR4 205 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 FAM210BQ96KR6 192 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 CLEC3BP05452 202 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 GPR6P46095 362 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 DPPA3Q6W0C5 159 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 GLRX5Q86SX6 157 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 EIF4E3Q8N5X7 224 aaKnown RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 KDF1Q8NAX2 398 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 MANBALQ9NQG1 85 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 KBTBD11O94819 623 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 SRP14P37108 136 aaKnown RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 HOXA4Q00056 320 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-202ENST00000338368 ARL16Q0P5N6 197 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 FAM216BQ8N7L0 139 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 PXMP4Q9Y6I8 212 aa5.31□□□□□ -1.56
PRKDC-202ENST00000338368 CNN1P51911 297 aaKnown RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 C12orf57Q99622 126 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 DNM1P46Q6ZS02 220 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 SLC24A4Q8NFF2 622 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 OR51B2Q9Y5P1 312 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 IGHV1-69-2A0A0G2JMI3 117 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 LILRA1O75019 489 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 SRSF6Q13247 344 aaKnown RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 C5orf24Q7Z6I8 188 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF729A6NN14 1252 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 FGF16O43320 207 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 RNF166Q96A37 237 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 TCF19Q9Y242 345 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 TANC2Q9HCD6 1990 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 RBP4P02753 201 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 RNF2Q99496 336 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 CEACAM18A8MTB9 384 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 LDLRAD3Q86YD5 345 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 IGHV3-72A0A0B4J1Y9 119 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 C11orf94C9JXX5 98 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 FAM87AP0C7U9 286 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 PSG5Q15238 335 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 MISP3Q96FF7 219 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 MED13Q9UHV7 2174 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms