RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 H0YIZ8 118 aa13.41□□□□□ -0.26
HDAC5-202ENST00000336057 OR2J3O76001 311 aa13.41□□□□□ -0.26
HDAC5-202ENST00000336057 KHDC1LQ5JSQ8 128 aa13.41□□□□□ -0.26
HDAC5-202ENST00000336057 VN1R17PQ8TDU5 208 aa13.41□□□□□ -0.26
HDAC5-202ENST00000336057 GSX1Q9H4S2 264 aaPredicted RBP13.41□□□□□ -0.26
HDAC5-202ENST00000336057 FOXJ2Q9P0K8 574 aa13.41□□□□□ -0.26
HDAC5-202ENST00000336057 CEACAM18A8MTB9 384 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 UMODP07911 640 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 PAFAH1B2P68402 229 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 PQLC2Q6ZP29 291 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 SSX8Q7RTT4 187 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 LYZL4Q96KX0 146 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 TBX15Q96SF7 602 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 ICE1Q9Y2F5 2266 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 MED12Q93074 2177 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 PQLC2LA1A4F0 135 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 GDF9O60383 454 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 CTSSP25774 331 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 SLC35E4Q6ICL7 350 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
HDAC5-202ENST00000336057 PARLQ9H300 379 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 PAM16Q9Y3D7 125 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 F8VVB4 439 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 F8VWA3 439 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 KBTBD11O94819 623 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 FTH1P19P0C7X4 201 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 SMIM17P0DL12 118 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 BRS3P32247 399 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 RIGQ13278 110 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 ATP1A1-AS1Q5TC04 95 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 METTL1Q9UBP6 276 aaKnown RBP13.4□□□□□ -0.26
HDAC5-202ENST00000336057 LOC102723996A0A087X1L8 192 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 MT-ND6P03923 174 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 MFAP2P55001 183 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 ZNF343Q6P1L6 599 aa13.4□□□□□ -0.26
HDAC5-202ENST00000336057 RHBDL1O75783 438 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 RPL8P62917 257 aaKnown RBP13.39□□□□□ -0.27
HDAC5-202ENST00000336057 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 PTPRDP23468 1912 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 LINC00869P0C866 280 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 AGAP20933 346 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 SSTR5P35346 364 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 SELENOTP62341 195 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 Q8WTZ3 238 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 MESP1Q9BRJ9 268 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 TCF19Q9Y242 345 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 TMEM250H0YL14 139 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 HYPMO75409 117 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 GCGP01275 180 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 CFHR1Q03591 330 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 A0A0A6YYD4 124 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 TCAPO15273 167 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 Q6ZT83 130 aa13.39□□□□□ -0.27
HDAC5-202ENST00000336057 IGHV3-21A0A0B4J1V1 117 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 FAM87AP0C7U9 286 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 ARL14EPLP0DKL9 152 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 SLC35B1P78383 322 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 ZDHHC8Q9ULC8 765 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 MC5RP33032 325 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 MMDQ15546 238 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 FAM222BQ8WU58 562 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 GOLT1BQ9Y3E0 138 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 FGF16O43320 207 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 LINC00271P0C7V0 271 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 RPL27AP46776 148 aaKnown RBP13.38□□□□□ -0.27
HDAC5-202ENST00000336057 KRTCAP3Q53RY4 240 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 COA4Q9NYJ1 87 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 IDI2-AS1Q9NZ38 188 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 C1RLQ9NZP8 487 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 IBA57Q5T440 356 aaKnown RBP13.38□□□□□ -0.27
HDAC5-202ENST00000336057 STPG1Q5TH74 334 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 OR8I2Q8N0Y5 310 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 ABHD12Q8N2K0 398 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 TMEM56-RWDD3S4R434 201 aa13.38□□□□□ -0.27
HDAC5-202ENST00000336057 C12orf77C9JDV5 145 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 DIRC3C9JPN6 131 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 EFNA2O43921 213 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 LGALS7P47929 136 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 ZNF596Q8TC21 504 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 KLHDC3Q9BQ90 382 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 WASHC3Q9Y3C0 194 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 M0QZ24 198 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 WNT9BO14905 357 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 SRP19P09132 144 aaKnown RBP13.37□□□□□ -0.27
HDAC5-202ENST00000336057 HIGD1AQ9Y241 93 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 MRPS18CQ9Y3D5 142 aaKnown RBP13.37□□□□□ -0.27
HDAC5-202ENST00000336057 J3QR89 54 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 DLL1O00548 723 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 ABLIM2Q6H8Q1 611 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 MAP1LC3CQ9BXW4 147 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 THSD7BQ9C0I4 1608 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 PROB1E7EW31 1015 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 LDLRAD4O15165 306 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 SNRPCP09234 159 aaKnown RBP13.37□□□□□ -0.27
HDAC5-202ENST00000336057 LRRC75BQ2VPJ9 315 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 FGF11Q92914 225 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
HDAC5-202ENST00000336057 HSPB9Q9BQS6 159 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms