RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 C16orf52Q8NHV5 167 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 NAA38Q9BRA0 125 aaKnown RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 TMEM133Q9H2Q1 129 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 CDIP1Q9H305 208 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 OR1A1Q9P1Q5 309 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 PLPP1O14494 284 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 CXorf1O96002 111 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 EVI2AP22794 236 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 RPS4XP62701 263 aaKnown RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 RUNX3Q13761 415 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 ZNF146Q15072 292 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 MLF2Q15773 248 aaPredicted RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 HLA-DQA1Q5Y7H0 255 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 FAM57BQ71RH2 274 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 OR1L1Q8NH94 360 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 APOOQ9BUR5 198 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 SIGLEC9Q9Y336 463 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 ATG2AQ2TAZ0 1938 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 DENND4CQ5VZ89 1909 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 PIGBOS1A0A0B4J2F0 54 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 KIR2DS1A0A191URI9 304 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 TMEM262E9PQX1 116 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 APOMO95445 188 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 MPIG6BO95866 241 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 HBG1P69891 147 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 HBG2P69892 147 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 KIR2DS1Q14954 304 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 YAF2Q8IY57 180 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 OR2T6Q8NHC8 308 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 RAB40CQ96S21 281 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 SAP30LQ9HAJ7 183 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 FNDC10F2Z333 226 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 APCSP02743 223 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 AMY1AP04745 511 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 CELA2BP08218 269 aaPredicted RBP7.27□□□□□ -1.25
TDP1-201ENST00000335725 TLE1Q04724 770 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 GAGE13Q4V321 117 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 C2orf27AQ580R0 203 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 C2orf91Q6ZV80 131 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 LYPD6Q86Y78 171 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 TMEM204Q9BSN7 226 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 TMEM59Q9BXS4 323 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 LIN7CQ9NUP9 197 aaKnown RBP7.27□□□□□ -1.25
TDP1-201ENST00000335725 TIMM9Q9Y5J7 89 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 COL4A4P53420 1690 aaPredicted RBP7.27□□□□□ -1.25
TDP1-201ENST00000335725 PAGE4O60829 102 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 RENP00797 406 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 IGHV3-7P01780 117 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 ATP1B2P14415 290 aaPredicted RBP7.27□□□□□ -1.25
TDP1-201ENST00000335725 OR1D5P58170 312 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 SLC23A3Q6PIS1 610 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 MMD2Q8IY49 270 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 VSTM2LQ96N03 204 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 VSIRQ9H7M9 311 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 RAB9BQ9NP90 201 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 SCN2AQ99250 2005 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 HLA-DOBP13765 273 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 UCNP55089 124 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 NDUFV3P56181 108 aaKnown RBP7.27□□□□□ -1.25
TDP1-201ENST00000335725 OTOSQ8NHW6 89 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 DDB2Q92466 427 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 SPANXCQ9NY87 97 aa7.27□□□□□ -1.25
TDP1-201ENST00000335725 C21orf140B9A014 251 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 NPPBP16860 134 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 RPS12P25398 132 aaKnown RBP7.26□□□□□ -1.25
TDP1-201ENST00000335725 FOXI1Q12951 378 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 MYBPHQ13203 477 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 DUSP28Q4G0W2 176 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 ZNF695Q8IW36 515 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 OSR1Q8TAX0 266 aaPredicted RBP7.26□□□□□ -1.25
TDP1-201ENST00000335725 BAHD1Q8TBE0 780 aaPredicted RBP7.26□□□□□ -1.25
TDP1-201ENST00000335725 MAP1LC3CQ9BXW4 147 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 IL23AQ9NPF7 189 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 CRIM1Q9NZV1 1036 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 R4GN57 208 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 ARID1AO14497 2285 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 IGLV3-16A0A075B6K0 115 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 A1L4Q6 167 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 BMPR1BO00238 502 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 ISG15P05161 165 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 NHLRC4P0CG21 123 aaPredicted RBP7.26□□□□□ -1.25
TDP1-201ENST00000335725 IFITM1P13164 125 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 CPMP14384 443 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 AREGP15514 252 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 NTF4P34130 210 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 XGP55808 180 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 RPS15AP62244 130 aaKnown RBP7.26□□□□□ -1.25
TDP1-201ENST00000335725 MGAT2Q10469 447 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 GAGE2BQ13066 116 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 FHL1Q13642 323 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 GAGE2EQ4V326 116 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 SH2D6Q7Z4S9 175 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 SUMF1Q8NBK3 374 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 ADTRPQ96IZ2 230 aa7.26□□□□□ -1.25
TDP1-201ENST00000335725 GPX7Q96SL4 187 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms