RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SERF2P84101 59 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 SRSF6Q13247 344 aaKnown RBP11.03□□□□□ -0.64
VSTM4-202ENST00000332853 ZNF596Q8TC21 504 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 TLNRD1Q9H1K6 362 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 JPT1Q9UK76 154 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 IGHV1-69-2A0A0G2JMI3 117 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 CD40P25942 277 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 RPL27AP46776 148 aaKnown RBP11.03□□□□□ -0.64
VSTM4-202ENST00000332853 RPL8P62917 257 aaKnown RBP11.03□□□□□ -0.64
VSTM4-202ENST00000332853 BSPH1Q075Z2 132 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 SLC35E4Q6ICL7 350 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 OR13A1Q8NGR1 328 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 Q8WTZ3 238 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 PARD6AQ9NPB6 346 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 HTR1DP28221 377 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 TUBD1Q9UJT1 453 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
VSTM4-202ENST00000332853 NDUFB4O95168 129 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 CSN3P07498 182 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 FCER1GP30273 86 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 C1RLQ9NZP8 487 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 TRAV14DV4A0A0A6YYC5 116 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 SMIM17P0DL12 118 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 PAXXQ9BUH6 204 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 IGSF23A1L1A6 192 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 PRB3Q04118 309 aaPredicted RBP11.02□□□□□ -0.64
VSTM4-202ENST00000332853 RNF144BQ7Z419 303 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 OR8I2Q8N0Y5 310 aa11.02□□□□□ -0.64
VSTM4-202ENST00000332853 SLC35B1P78383 322 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 RTN4RL2Q86UN3 420 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 DOLPP1Q86YN1 238 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 FAM216BQ8N7L0 139 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 SCNM1Q9BWG6 230 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 SFTPCP11686 197 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 GLRXP35754 106 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 MS4A10Q96PG2 267 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 TMPRSS5Q9H3S3 457 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 GP6Q9HCN6 339 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 MUC15Q8N387 334 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 PLPPR1Q8TBJ4 325 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 FAM122AQ96E09 287 aa11.02□□□□□ -0.65
VSTM4-202ENST00000332853 B4DEV8 164 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 IER3P46695 156 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 LURAP1Q96LR2 239 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 RSPO3Q9BXY4 272 aaPredicted RBP11.01□□□□□ -0.65
VSTM4-202ENST00000332853 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 IGKV1D-8A0A087WSZ0 117 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 TMSB15BA0A087X1C1 80 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 NRN1LQ496H8 165 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 STARD4Q96DR4 205 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 FOXF2Q12947 444 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 ZCCHC24Q8N2G6 241 aaKnown RBP11.01□□□□□ -0.65
VSTM4-202ENST00000332853 P01737 135 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 LINC00869P0C866 280 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 PRNTQ86SH4 94 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 LSM10Q969L4 123 aaKnown RBP11.01□□□□□ -0.65
VSTM4-202ENST00000332853 NABP1Q96AH0 204 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 VAMP8Q9BV40 100 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 FOXD3Q9UJU5 478 aaPredicted RBP11.01□□□□□ -0.65
VSTM4-202ENST00000332853 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 IGHV3OR16-10A0A075B7F0 116 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 C17orf98A8MV24 154 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 CCL1P22362 96 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 WDR31Q8NA23 367 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 LILRB1Q8NHL6 650 aaPredicted RBP11.01□□□□□ -0.65
VSTM4-202ENST00000332853 FAM57AQ8TBR7 257 aa11.01□□□□□ -0.65
VSTM4-202ENST00000332853 COL8A1P27658 744 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 SSX8Q7RTT4 187 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 C11orf42Q8N5U0 333 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 WFDC3Q8IUB2 231 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 VOPP1Q96AW1 172 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 ELOVL5Q9NYP7 299 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 GFRA1P56159 465 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 RND3P61587 244 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 IGKV1D-13A0A0B4J2D9 117 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 WISP1O95388 367 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 IGKV1-13P0DP09 117 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 CRISP2P16562 243 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 FAM162BQ5T6X4 162 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 PRSS3P2Q8NHM4 247 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 P2RX4Q99571 388 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 TRAV20A0A0B4J274 112 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 SS18L1O75177 396 aaPredicted RBP11□□□□□ -0.65
VSTM4-202ENST00000332853 PEAR1Q5VY43 1037 aaPredicted RBP11□□□□□ -0.65
VSTM4-202ENST00000332853 NHLRC2Q8NBF2 726 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 TCF19Q9Y242 345 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 UFC1Q9Y3C8 167 aa11□□□□□ -0.65
VSTM4-202ENST00000332853 IQCF6A8MYZ5 107 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 DANCRP0C864 163 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 MC5RP33032 325 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 ZNF137PP52743 207 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
VSTM4-202ENST00000332853 DHRS11Q6UWP2 260 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 LRP11Q86VZ4 500 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 GRAMD2BQ96HH9 432 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 DLL1O00548 723 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
VSTM4-202ENST00000332853 KLRB1Q12918 225 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms